RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 C14orf119Q9NWQ9 140 aa4.67□□□□□ -1.66
LINC01239-201ENST00000433645 AURKAIP1Q9NWT8 199 aaPredicted RBP4.67□□□□□ -1.66
LINC01239-201ENST00000433645 COL4A3BPQ9Y5P4 624 aa4.67□□□□□ -1.66
LINC01239-201ENST00000433645 SHROOM4Q9ULL8 1493 aa4.67□□□□□ -1.66
LINC01239-201ENST00000433645 CYP27B1O15528 508 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 PHF2O75151 1096 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 GASTP01350 101 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 GYPEP15421 78 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 MTNR1BP49286 362 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 SLC5A3P53794 718 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 HHEXQ03014 270 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 MGAT5Q09328 741 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 FOXL1Q12952 345 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 PRKD1Q15139 912 aaPredicted RBP4.66□□□□□ -1.66
LINC01239-201ENST00000433645 PTPROQ16827 1216 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 MUM1Q2TAK8 710 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 METTL24Q5JXM2 366 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 KRT40Q6A162 431 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 FAM111BQ6SJ93 734 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 FAM180AQ6UWF9 173 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 BTNL9Q6UXG8 535 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 Q6ZSN1 163 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 ANKRD35Q8N283 1001 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 CNTD1Q8N815 330 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 SNX33Q8WV41 574 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 TCF25Q9BQ70 676 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 PDCD2LQ9BRP1 358 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 ST6GALNAC2Q9UJ37 374 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 RCAN3Q9UKA8 241 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 MYRFQ9Y2G1 1151 aa4.66□□□□□ -1.66
LINC01239-201ENST00000433645 UBE2QL1A1L167 161 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 MUSKO15146 869 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 CFBP00751 764 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 LPLP06858 475 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 IBSPP21815 317 aaPredicted RBP4.65□□□□□ -1.67
LINC01239-201ENST00000433645 BUD31P41223 144 aaPredicted RBP4.65□□□□□ -1.67
LINC01239-201ENST00000433645 NPEPPSP55786 919 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 SCAND1P57086 179 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 FAM177A1Q8N128 213 aaPredicted RBP4.65□□□□□ -1.67
LINC01239-201ENST00000433645 PRPF38AQ8NAV1 312 aaKnown RBP4.65□□□□□ -1.67
LINC01239-201ENST00000433645 RPL10LQ96L21 214 aaKnown RBP4.65□□□□□ -1.67
LINC01239-201ENST00000433645 PRDM12Q9H4Q4 367 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 ZNF277Q9NRM2 450 aaPredicted RBP4.65□□□□□ -1.67
LINC01239-201ENST00000433645 DPP7Q9UHL4 492 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 SCOCQ9UIL1 159 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 NOP58Q9Y2X3 529 aaKnown RBP4.65□□□□□ -1.67
LINC01239-201ENST00000433645 SPEF1Q9Y4P9 236 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 RPTORQ8N122 1335 aa4.65□□□□□ -1.67
LINC01239-201ENST00000433645 ANKRD62A6NC57 917 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 TMEM127O75204 238 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 NCLP19338 710 aaKnown RBP4.64□□□□□ -1.67
LINC01239-201ENST00000433645 ACO1P21399 889 aaKnown RBP4.64□□□□□ -1.67
LINC01239-201ENST00000433645 CTSSP25774 331 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 MSX2P35548 267 aaPredicted RBP4.64□□□□□ -1.67
LINC01239-201ENST00000433645 CDKN1CP49918 316 aaPredicted RBP4.64□□□□□ -1.67
LINC01239-201ENST00000433645 GUCY2FP51841 1108 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 UBE3CQ15386 1083 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 CDSNQ15517 529 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 ADRM1Q16186 407 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 SYDE2Q5VT97 1194 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 DBX2Q6ZNG2 339 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 APBB1IPQ7Z5R6 666 aaPredicted RBP4.64□□□□□ -1.67
LINC01239-201ENST00000433645 THEMISQ8N1K5 641 aaPredicted RBP4.64□□□□□ -1.67
LINC01239-201ENST00000433645 COG1Q8WTW3 980 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 TSPEARQ8WU66 669 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 MIEF2Q96C03 454 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 GPR20Q99678 358 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 GREM2Q9H772 168 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 IFT122Q9HBG6 1241 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 CCM2LQ9NUG4 571 aaPredicted RBP4.64□□□□□ -1.67
LINC01239-201ENST00000433645 ING3Q9NXR8 418 aa4.64□□□□□ -1.67
LINC01239-201ENST00000433645 HECAQ9UBI9 543 aaPredicted RBP4.64□□□□□ -1.67
LINC01239-201ENST00000433645 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 MFAP3LO75121 409 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 IPO13O94829 963 aaKnown RBP4.63□□□□□ -1.67
LINC01239-201ENST00000433645 CRHR1P34998 444 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 DUSP2Q05923 314 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 MALLQ13021 153 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 MRPL49Q13405 166 aaKnown RBP4.63□□□□□ -1.67
LINC01239-201ENST00000433645 MUM1L1Q5H9M0 696 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 FKBP15Q5T1M5 1219 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 MBNL2Q5VZF2 373 aaKnown RBP4.63□□□□□ -1.67
LINC01239-201ENST00000433645 HTR3DQ70Z44 454 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 CMIPQ8IY22 773 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 AMOTL1Q8IY63 956 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 CBARPQ8N350 705 aaPredicted RBP4.63□□□□□ -1.67
LINC01239-201ENST00000433645 D2HGDHQ8N465 521 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 GLB1L3Q8NCI6 653 aaPredicted RBP4.63□□□□□ -1.67
LINC01239-201ENST00000433645 GPR156Q8NFN8 814 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 ZNF512Q96ME7 567 aaPredicted RBP4.63□□□□□ -1.67
LINC01239-201ENST00000433645 ADOQ96SZ5 270 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 TRIM8Q9BZR9 551 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 TYW1Q9NV66 732 aaKnown RBP4.63□□□□□ -1.67
LINC01239-201ENST00000433645 DNAJC28Q9NX36 388 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 EDARQ9UNE0 448 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 CLCA2Q9UQC9 943 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 SH3BP1Q9Y3L3 701 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 GPR45Q9Y5Y3 372 aa4.63□□□□□ -1.67
LINC01239-201ENST00000433645 HOXA3O43365 443 aaPredicted RBP4.62□□□□□ -1.67
LINC01239-201ENST00000433645 RBP3P10745 1247 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms