RNA–Protein interactions for RNA: ENST00000433436.6

CLTA-204, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-204ENST00000433436 FZD8Q9H461 694 aa25.46■■□□□ 1.67
CLTA-204ENST00000433436 PRMT7Q9NVM4 692 aaPredicted RBP25.46■■□□□ 1.67
CLTA-204ENST00000433436 ZNF623O75123 536 aa25.45■■□□□ 1.66
CLTA-204ENST00000433436 BMPR1AP36894 532 aa25.45■■□□□ 1.66
CLTA-204ENST00000433436 DMP1Q13316 513 aaPredicted RBP25.45■■□□□ 1.66
CLTA-204ENST00000433436 SPOUT1Q5T280 376 aaKnown RBP25.45■■□□□ 1.66
CLTA-204ENST00000433436 CDR2LQ86X02 465 aaPredicted RBP25.45■■□□□ 1.66
CLTA-204ENST00000433436 MAFAQ8NHW3 353 aaPredicted RBP25.45■■□□□ 1.66
CLTA-204ENST00000433436 HELQQ8TDG4 1101 aa25.45■■□□□ 1.66
CLTA-204ENST00000433436 LARP4BQ92615 738 aaKnown RBP25.45■■□□□ 1.66
CLTA-204ENST00000433436 CHAMP1Q96JM3 812 aa25.45■■□□□ 1.66
CLTA-204ENST00000433436 EIF2AQ9BY44 585 aaKnown RBP25.45■■□□□ 1.66
CLTA-204ENST00000433436 KMT5AQ9NQR1 393 aa25.45■■□□□ 1.66
CLTA-204ENST00000433436 USP20Q9Y2K6 914 aa25.45■■□□□ 1.66
CLTA-204ENST00000433436 MYO9BQ13459 2157 aa25.45■■□□□ 1.66
CLTA-204ENST00000433436 MEIS3P2A8K0S8 358 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 LPXNO60711 386 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 CUTAO60888 179 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 PRKCBP05771 671 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 EFNA5P52803 228 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 TMEM132AQ24JP5 1023 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 PPP4R3CPQ6ZMV5 832 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 KCNG4Q8TDN1 519 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 PPM1EQ8WY54 764 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 PGBD4Q96DM1 585 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 PRIMPOLQ96LW4 560 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 CCDC113Q9H0I3 377 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 TYW1Q9NV66 732 aaKnown RBP25.44■■□□□ 1.66
CLTA-204ENST00000433436 CHD7Q9P2D1 2997 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 HCSTQ9UBK5 93 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 RWDD3Q9Y3V2 267 aa25.44■■□□□ 1.66
CLTA-204ENST00000433436 TTLL13PA6NNM8 815 aa25.43■■□□□ 1.66
CLTA-204ENST00000433436 GTPBP6O43824 516 aaPredicted RBP25.43■■□□□ 1.66
CLTA-204ENST00000433436 KRT18P05783 430 aaKnown RBP25.43■■□□□ 1.66
CLTA-204ENST00000433436 NCLP19338 710 aaKnown RBP25.43■■□□□ 1.66
CLTA-204ENST00000433436 ME1P48163 572 aa25.43■■□□□ 1.66
CLTA-204ENST00000433436 GPM6BQ13491 265 aa25.43■■□□□ 1.66
CLTA-204ENST00000433436 PRPF4BQ13523 1007 aaKnown RBP25.43■■□□□ 1.66
CLTA-204ENST00000433436 FAM187BQ17R55 369 aa25.43■■□□□ 1.66
CLTA-204ENST00000433436 MICALL1Q8N3F8 863 aa25.43■■□□□ 1.66
CLTA-204ENST00000433436 CCDC51Q96ER9 411 aa25.43■■□□□ 1.66
CLTA-204ENST00000433436 REEP2Q9BRK0 252 aa25.43■■□□□ 1.66
CLTA-204ENST00000433436 C17orf75Q9HAS0 396 aa25.43■■□□□ 1.66
CLTA-204ENST00000433436 STK17AQ9UEE5 414 aa25.43■■□□□ 1.66
CLTA-204ENST00000433436 A0A087X0B3 334 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 A0A1B0GUA9 196 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 H3BNC9 293 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 K7ERI5 159 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 SLC16A4O15374 487 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 PLS3P13797 630 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 CCDC85BQ15834 202 aaPredicted RBP25.42■■□□□ 1.66
CLTA-204ENST00000433436 CCDC73Q6ZRK6 1079 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 LRRC55Q6ZSA7 311 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 MRPL10Q7Z7H8 261 aaKnown RBP25.42■■□□□ 1.66
CLTA-204ENST00000433436 PDILTQ8N807 584 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 SMG8Q8ND04 991 aaKnown RBP25.42■■□□□ 1.66
CLTA-204ENST00000433436 TRIM6Q9C030 488 aaPredicted RBP25.42■■□□□ 1.66
CLTA-204ENST00000433436 RCOR1Q9UKL0 485 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 PCDHA7Q9UN72 937 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 IPPQ9Y573 584 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 MTCH2Q9Y6C9 303 aa25.42■■□□□ 1.66
CLTA-204ENST00000433436 FNDC1Q4ZHG4 1894 aaPredicted RBP25.42■■□□□ 1.66
CLTA-204ENST00000433436 CNTNAP2Q9UHC6 1331 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 ACKR2O00590 384 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 NPTXRO95502 500 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 EDN1P05305 212 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 RB1P06400 928 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 STAT6P42226 847 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 GIT2Q14161 759 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 NAALADL2Q58DX5 795 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 AXDND1Q5T1B0 1012 aaPredicted RBP25.41■■□□□ 1.66
CLTA-204ENST00000433436 SLC27A1Q6PCB7 646 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 SHC4Q6S5L8 630 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 GLB1LQ6UWU2 654 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 AGMOQ6ZNB7 445 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 ZHX3Q9H4I2 956 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 INPP5FQ9Y2H2 1132 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 HES2Q9Y543 173 aa25.41■■□□□ 1.66
CLTA-204ENST00000433436 C5orf67F2Z3F1 127 aa25.4■■□□□ 1.66
CLTA-204ENST00000433436 OFD1O75665 1012 aa25.4■■□□□ 1.66
CLTA-204ENST00000433436 LRRC43Q8N309 656 aa25.4■■□□□ 1.66
CLTA-204ENST00000433436 CNNM3Q8NE01 707 aa25.4■■□□□ 1.66
CLTA-204ENST00000433436 NTPCRQ9BSD7 190 aaKnown RBP25.4■■□□□ 1.66
CLTA-204ENST00000433436 C11orf84Q9BUA3 381 aaPredicted RBP25.4■■□□□ 1.66
CLTA-204ENST00000433436 APOL6Q9BWW8 343 aa25.4■■□□□ 1.66
CLTA-204ENST00000433436 RNF39Q9H2S5 420 aa25.4■■□□□ 1.66
CLTA-204ENST00000433436 CWH43Q9H720 699 aa25.4■■□□□ 1.66
CLTA-204ENST00000433436 ARHGAP28Q9P2N2 729 aa25.4■■□□□ 1.66
CLTA-204ENST00000433436 ODF2LQ9ULJ1 636 aa25.4■■□□□ 1.66
CLTA-204ENST00000433436 RBM19Q9Y4C8 960 aaKnown RBP25.4■■□□□ 1.66
CLTA-204ENST00000433436 NLRC5Q86WI3 1866 aa25.4■■□□□ 1.66
CLTA-204ENST00000433436 COL4A4P53420 1690 aaPredicted RBP25.39■■□□□ 1.66
CLTA-204ENST00000433436 FAM13AO94988 1023 aa25.39■■□□□ 1.66
CLTA-204ENST00000433436 ITGA4P13612 1032 aa25.39■■□□□ 1.66
CLTA-204ENST00000433436 POU3F3P20264 500 aaPredicted RBP25.39■■□□□ 1.66
CLTA-204ENST00000433436 SMTNP53814 917 aa25.39■■□□□ 1.66
CLTA-204ENST00000433436 KRT85P78386 507 aa25.39■■□□□ 1.66
CLTA-204ENST00000433436 NT5DC1Q5TFE4 455 aa25.39■■□□□ 1.66
CLTA-204ENST00000433436 SV2BQ7L1I2 683 aa25.39■■□□□ 1.66
CLTA-204ENST00000433436 MYCT1Q8N699 235 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms