RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 STK33Q9BYT3 514 aa11.4□□□□□ -0.59
SMPD4-206ENST00000433118 RAB17Q9H0T7 212 aa11.4□□□□□ -0.59
SMPD4-206ENST00000433118 NR2E1Q9Y466 385 aa11.4□□□□□ -0.59
SMPD4-206ENST00000433118 ZNF536O15090 1300 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 ATP8B3O60423 1300 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 IGSF9BQ9UPX0 1349 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 IGLV3-22A0A075B6J6 115 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 GOLGA6L10A0A0M3HER8 536 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 DCDC2CA8MYV0 355 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 GAS7O60861 476 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 TMEM253P0C7T8 217 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 HIRAP54198 1017 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-206ENST00000433118 DR1Q01658 176 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 ZNF211Q13398 564 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-206ENST00000433118 CCDC121Q6ZUS5 278 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 FAM160B2Q86V87 743 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 DYDC2Q96IM9 177 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 CABS1Q96KC9 395 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 PARVGQ9HBI0 331 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 FRMD4BQ9Y2L6 1034 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 ZMYM2Q9UBW7 1377 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 COL2A1P02458 1487 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-206ENST00000433118 PSME4Q14997 1843 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 SRRM3A6NNA2 597 aaPredicted RBP11.39□□□□□ -0.59
SMPD4-206ENST00000433118 LRRN2O75325 713 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 TNFAIP3P21580 790 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 RPS12P25398 132 aaKnown RBP11.39□□□□□ -0.59
SMPD4-206ENST00000433118 FNTAP49354 379 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 CEP55Q53EZ4 464 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 AGBL2Q5U5Z8 902 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 CCDC125Q86Z20 511 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 RDH13Q8NBN7 331 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 SLC30A5Q8TAD4 765 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 BORCS6Q96GS4 357 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 ZNF577Q9BSK1 485 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 WDR11Q9BZH6 1224 aa11.39□□□□□ -0.59
SMPD4-206ENST00000433118 CNOT8Q9UFF9 292 aaKnown RBP11.39□□□□□ -0.59
SMPD4-206ENST00000433118 BHMG1C9JSJ3 638 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-206ENST00000433118 EIF3DO15371 548 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMPD4-206ENST00000433118 TRAPPC3O43617 180 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 KRT13P13646 458 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 MMP14P50281 582 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 PLS1Q14651 629 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 CBWD6Q4V339 395 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 CBWD3Q5JTY5 395 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 CBWD5Q5RIA9 395 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 DCAF12L1Q5VU92 463 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 FAM178BQ8IXR5 827 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 BANK1Q8NDB2 785 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 THAP2Q9H0W7 228 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 PICK1Q9NRD5 415 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 RIPK3Q9Y572 518 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 GOLGA6L7A0A1B0GV03 622 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 CTNND1O60716 968 aaKnown RBP11.38□□□□□ -0.59
SMPD4-206ENST00000433118 CCDC172P0C7W6 258 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 CIITAP33076 1130 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 CDR1P51861 262 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 ARHGEF26Q96DR7 871 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 NAP1L3Q99457 506 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-206ENST00000433118 INTS2Q9H0H0 1204 aaKnown RBP11.38□□□□□ -0.59
SMPD4-206ENST00000433118 DDX20Q9UHI6 824 aaKnown RBP11.38□□□□□ -0.59
SMPD4-206ENST00000433118 DAAM1Q9Y4D1 1078 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 NCANO14594 1321 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 PIK3CDO00329 1044 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 DDX3YO15523 660 aaKnown RBP11.38□□□□□ -0.59
SMPD4-206ENST00000433118 ICAM1P05362 532 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 PTENP60484 403 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 MYL7Q01449 175 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 SP4Q02446 784 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 CNKSR2Q8WXI2 1034 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 SEC14L1Q92503 715 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 GLG1Q92896 1179 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 TAAR1Q96RJ0 339 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 FHDC1Q9C0D6 1143 aaPredicted RBP11.38□□□□□ -0.59
SMPD4-206ENST00000433118 TAS2R14Q9NYV8 317 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 APEX2Q9UBZ4 518 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 FER1L6Q2WGJ9 1857 aa11.38□□□□□ -0.59
SMPD4-206ENST00000433118 SLITRK3O94933 977 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 ITGB5P18084 799 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 RPS6P62753 249 aaKnown RBP11.37□□□□□ -0.59
SMPD4-206ENST00000433118 QPCTQ16769 361 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 ODR4Q5SWX8 454 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 STXBP4Q6ZWJ1 553 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 OTOP1Q7RTM1 612 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 CPLX4Q7Z7G2 160 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 CCDC13Q8IYE1 715 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 SYCP3Q8IZU3 236 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 RAPGEF5Q92565 580 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.591e-11■■■■■ 41.1
SMPD4-206ENST00000433118 HSD17B14Q9BPX1 270 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 CARD9Q9H257 536 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 LRRC4CQ9HCJ2 640 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 ERVK-5Q9HDB9 667 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 TMOD4Q9NZQ9 345 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 WRAP73Q9P2S5 460 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-206ENST00000433118 TTC7AQ9ULT0 858 aaPredicted RBP11.37□□□□□ -0.59
SMPD4-206ENST00000433118 WDR46O15213 610 aaKnown RBP11.37□□□□□ -0.59
SMPD4-206ENST00000433118 EXOC3O60645 756 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 PLTPP55058 493 aa11.37□□□□□ -0.59
SMPD4-206ENST00000433118 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms