RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 COPS2P61201 443 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 TRIM28Q13263 835 aaKnown RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 TMEM266Q2M3C6 531 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 EGFLAMQ63HQ2 1017 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 KIAA1841Q6NSI8 718 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 TATDN1Q6P1N9 297 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 TRAPPC11Q7Z392 1133 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 CYP2U1Q7Z449 544 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 MRPL10Q7Z7H8 261 aaKnown RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 SLC35F6Q8N357 371 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 MREGQ8N565 214 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 PIGOQ8TEQ8 1089 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 GIPC3Q8TF64 312 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 RAPGEF5Q92565 580 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 FERMT2Q96AC1 680 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 TSGA13Q96PP4 275 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 PLEKHF1Q96S99 279 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 IFT22Q9H7X7 185 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 PLGRKTQ9HBL7 147 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 SH2B1Q9NRF2 756 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 EMC3Q9P0I2 261 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 DNM3Q9UQ16 869 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 ATP11BQ9Y2G3 1177 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 CEMIPQ8WUJ3 1361 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 PCDH11XQ9BZA7 1347 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 ZNF233A6NK53 670 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 INO80B-WBP1J3KQ70 363 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 PSMA4P25789 261 aaKnown RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 TMPRSS15P98073 1019 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 SEMA3AQ14563 771 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 TAF1CQ15572 869 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 ZC2HC1CQ53FD0 456 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 HSP90AA5PQ58FG0 334 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 FAM133BQ5BKY9 247 aaKnown RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 WASHC2DQ5SRD0 308 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 RESP18Q5W5W9 173 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 GSPT2Q8IYD1 628 aaKnown RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 SHCBP1Q8NEM2 672 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 PDZD8Q8NEN9 1154 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 TTLQ8NG68 377 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 NELFBQ8WX92 580 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 LTV1Q96GA3 475 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 DNAJC1Q96KC8 554 aaKnown RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 RUBCNLQ9H714 662 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 CAAP1Q9H8G2 361 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 GPHNQ9NQX3 736 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 DBF4Q9UBU7 674 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-202ENST00000432954 SPEF1Q9Y4P9 236 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 ADGRG1Q9Y653 693 aa11.65□□□□□ -0.54
CCDC171-202ENST00000432954 IQSEC2Q5JU85 1478 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 PVALEFA0A1B0GWK0 134 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 GRXCR2A6NFK2 248 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 LACTBL1A8MY62 500 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 ZNF12P17014 697 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 HPDP32754 393 aaPredicted RBP11.64□□□□□ -0.55
CCDC171-202ENST00000432954 TRIM23P36406 574 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 PLCD1P51178 756 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 MRPS15P82914 257 aaKnown RBP11.64□□□□□ -0.55
CCDC171-202ENST00000432954 KCNC4Q03721 635 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 CAVIN4Q5BKX8 364 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 NIPAL1Q6NVV3 410 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 PPP1R21Q6ZMI0 780 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 IPCEF1Q8WWN9 437 aaPredicted RBP11.64□□□□□ -0.55
CCDC171-202ENST00000432954 SGK3Q96BR1 496 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 CHMP6Q96FZ7 201 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 CCDC77Q9BR77 488 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 KIAA1683Q9H0B3 1180 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 ASCC2Q9H1I8 757 aaPredicted RBP11.64□□□□□ -0.55
CCDC171-202ENST00000432954 OSBPL3Q9H4L5 887 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 PALMDQ9NP74 551 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 ASIC3Q9UHC3 531 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 PCDHGA8Q9Y5G5 932 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 ADGBQ8N7X0 1667 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 ADCY9O60503 1353 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 IRS4O14654 1257 aaPredicted RBP11.64□□□□□ -0.55
CCDC171-202ENST00000432954 HLA-DRAP01903 254 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 RARBP10826 455 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 ZNF3P17036 446 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 VCLP18206 1134 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 SLC26A3P40879 764 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 HNRNPFP52597 415 aaKnown RBP11.64□□□□□ -0.55
CCDC171-202ENST00000432954 ZNF135P52742 658 aaPredicted RBP11.64□□□□□ -0.55
CCDC171-202ENST00000432954 IST1P53990 364 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 LPIN1Q14693 890 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 CLVS2Q5SYC1 327 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 C8orf74Q6P047 294 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 IFT20Q8IY31 132 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 TTLL11Q8NHH1 800 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 BTBD6Q96KE9 485 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 VPS35Q96QK1 796 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 USP28Q96RU2 1077 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 TSG101Q99816 390 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 TMEM5Q9Y2B1 443 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 EFCAB6Q5THR3 1501 aa11.64□□□□□ -0.55
CCDC171-202ENST00000432954 OVOS2A0A0G2JMS6 1433 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 OVOS2A0A0J9YW53 1432 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 OVOS2Q6IE36 1432 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 PNMA6FA0A0J9YX94 578 aa11.63□□□□□ -0.55
CCDC171-202ENST00000432954 XPOTO43592 962 aaKnown RBP11.63□□□□□ -0.55
CCDC171-202ENST00000432954 GPC4O75487 556 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms