RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ARID3AQ99856 593 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 SAR1BQ9Y6B6 198 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 SRGAP2O75044 1071 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 LRRN2O75325 713 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 H2AFXP16104 143 aaPredicted RBP21.26■□□□□ 0.99
VRK2-205ENST00000432057 GLRA2P23416 452 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 PHLDB3Q6NSJ2 640 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 SLC7A3Q8WY07 619 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 PDCL3Q9H2J4 239 aa21.26■□□□□ 0.99
VRK2-205ENST00000432057 H0YCG3 227 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 TULP1O00294 542 aaPredicted RBP21.25■□□□□ 0.99
VRK2-205ENST00000432057 P4HA2O15460 535 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 BUB1O43683 1085 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 EVI5O60447 810 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 MXI1P50539 228 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 TARBP2Q15633 366 aaKnown RBP21.25■□□□□ 0.99
VRK2-205ENST00000432057 ARHGAP44Q17R89 818 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 ARHGEF19Q8IW93 802 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 ALS2CR12Q96Q35 445 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 GPR20Q99678 358 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 TMEM117Q9H0C3 514 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 NRBP2Q9NSY0 501 aa21.25■□□□□ 0.99
VRK2-205ENST00000432057 CCL15-CCL14A0A0B4J2E2 113 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 PDHXO00330 501 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 ARL2P36404 184 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 CCL15Q16663 113 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 HSDL1Q3SXM5 330 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 CELF3Q5SZQ8 465 aaKnown RBP21.24■□□□□ 0.99
VRK2-205ENST00000432057 TRIM50Q86XT4 487 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 CCDC127Q96BQ5 260 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 LRRIQ4A6NIV6 560 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 LRRIQ3A6PVS8 624 aaPredicted RBP21.24■□□□□ 0.99
VRK2-205ENST00000432057 ZSCAN20P17040 1043 aaPredicted RBP21.24■□□□□ 0.99
VRK2-205ENST00000432057 KLRC1P26715 233 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 RFC5P40937 340 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 CETN1Q12798 172 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 KIAA0753Q2KHM9 967 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 BRDTQ58F21 947 aaPredicted RBP21.24■□□□□ 0.99
VRK2-205ENST00000432057 TMEM63BQ5T3F8 832 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 KCNV1Q6PIU1 500 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 OLIG1Q8TAK6 271 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 MORC4Q8TE76 937 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 GTF3C2Q8WUA4 911 aaPredicted RBP21.24■□□□□ 0.99
VRK2-205ENST00000432057 RABGGTAQ92696 567 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 COPS5Q92905 334 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 MS4A4AQ96JQ5 239 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 FBXL18Q96ME1 805 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 NOX5Q96PH1 765 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 AZI2Q9H6S1 392 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 NAGPAQ9UK23 515 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 NENFQ9UMX5 172 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 USP20Q9Y2K6 914 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 JRKLQ9Y4A0 524 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 DAAM1Q9Y4D1 1078 aa21.24■□□□□ 0.99
VRK2-205ENST00000432057 CTAGE15A4D2H0 777 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 UNCXA6NJT0 531 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 BTBD19C9JJ37 291 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 CTAGE8P0CG41 777 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 CETPP11597 493 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 GARTP22102 1010 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 RFX1P22670 979 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 ANXA13P27216 316 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 MARK3P27448 753 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 NAMPTP43490 491 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 MCCD1P59942 119 aaPredicted RBP21.23■□□□□ 0.99
VRK2-205ENST00000432057 MAP2K1Q02750 393 aaPredicted RBP21.23■□□□□ 0.99
VRK2-205ENST00000432057 NAB2Q15742 525 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 CTAGE6Q86UF2 777 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 DNAAF5Q86Y56 855 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 CTAGE4Q8IX94 777 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 GPD1LQ8N335 351 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 GPRC5AQ8NFJ5 357 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 PARD3BQ8TEW8 1205 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 CAPZA3Q96KX2 299 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 TOPORSQ9NS56 1045 aaPredicted RBP21.23■□□□□ 0.99
VRK2-205ENST00000432057 EVPLQ92817 2033 aa21.23■□□□□ 0.99
VRK2-205ENST00000432057 NOP56O00567 594 aaKnown RBP21.22■□□□□ 0.99
VRK2-205ENST00000432057 LIG4P49917 911 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 NAP1L1P55209 391 aaKnown RBP21.22■□□□□ 0.99
VRK2-205ENST00000432057 CYP24A1Q07973 514 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 CCDC62Q6P9F0 684 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 RNF10Q8N5U6 811 aaKnown RBP21.22■□□□□ 0.99
VRK2-205ENST00000432057 GPR161Q8N6U8 529 aaKnown RBP21.22■□□□□ 0.99
VRK2-205ENST00000432057 DEPTORQ8TB45 409 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 LNX1Q8TBB1 728 aaPredicted RBP21.22■□□□□ 0.99
VRK2-205ENST00000432057 BRI3BPQ8WY22 251 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 GLG1Q92896 1179 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 MFSD14AQ96MC6 490 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 POP1Q99575 1024 aaKnown RBP21.22■□□□□ 0.99
VRK2-205ENST00000432057 PDGFCQ9NRA1 345 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 DDX3XO00571 662 aaKnown RBP eCLIP21.22■□□□□ 0.992e-11■□□□□ 11.2
VRK2-205ENST00000432057 LGR5O75473 907 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 ABCD1P33897 745 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 GTF2A2P52657 109 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 STRN3Q13033 797 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 C10orf76Q5T2E6 689 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 ALKBH5Q6P6C2 394 aaKnown RBP21.22■□□□□ 0.99
VRK2-205ENST00000432057 VPS36Q86VN1 386 aa21.22■□□□□ 0.99
VRK2-205ENST00000432057 DHX37Q8IY37 1157 aaKnown RBP21.22■□□□□ 0.99
VRK2-205ENST00000432057 FAM167AQ96KS9 214 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms