RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 PTPN14Q15678 1187 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 INAVAQ3KP66 663 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 HSDL1Q3SXM5 330 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 MGAT5BQ3V5L5 792 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 EFHBQ8N7U6 833 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 TOP1MTQ969P6 601 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 INPP4AQ96PE3 977 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 SEPT5Q99719 369 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 TIPINQ9BVW5 301 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 OXCT2Q9BYC2 517 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 OSBPL3Q9H4L5 887 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 ZFP14Q9HCL3 533 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 MAD2L2Q9UI95 211 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 GIT1Q9Y2X7 761 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 CLDN3O15551 220 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 NDUFS2O75306 463 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 MYBP10242 640 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 NUBP1P53384 320 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 TFF2Q03403 129 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 GRIK3Q13003 919 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 SV2BQ7L1I2 683 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 C11orf74Q86VG3 221 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 DIS3L2Q8IYB7 885 aaKnown RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 KREMEN2Q8NCW0 462 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 PCMTD1Q96MG8 357 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 GUCD1Q96NT3 240 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 IL17RBQ9NRM6 502 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 ANKEF1Q9NU02 776 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 SH3BP1Q9Y3L3 701 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 MTCH2Q9Y6C9 303 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 A0A087WZ62 844 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 RBM47A0AV96 593 aaKnown RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 SLC9A3R1O14745 358 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 PER2O15055 1255 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 SREBF1P36956 1147 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 DPP6P42658 865 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 ANAPC15P60006 121 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 CTTNQ14247 550 aaKnown RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 CT47A1Q5JQC4 288 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 DAB2IPQ5VWQ8 1189 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 RRAGBQ5VZM2 374 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 RNF219Q5W0B1 726 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 SPATA2LQ8IUW3 424 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 MSANTD4Q8NCY6 345 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 IRF7Q92985 503 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 ZNF274Q96GC6 653 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 FDXACB1Q9BRP7 624 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 LZTS1Q9Y250 596 aa5.03□□□□□ -1.6
UBE4A-202ENST00000431736 USP15Q9Y4E8 981 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-202ENST00000431736 IGKV6D-41A0A0C4DH26 115 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 ESYT2A0FGR8 921 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 INPPL1O15357 1258 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 SMC2O95347 1197 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 SIGLEC14Q08ET2 396 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 ORC2Q13416 577 aaPredicted RBP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 ZNF174Q15697 407 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 PLEKHG4Q58EX7 1191 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 RSRC2Q7L4I2 434 aaKnown RBP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 LIMD1Q9UGP4 676 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 MAGED2Q9UNF1 606 aaPredicted RBP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 YBX2Q9Y2T7 364 aaKnown RBP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 PCDHB2Q9Y5E7 798 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 MYMKA6NI61 221 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 LAD1O00515 517 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 EPB41L2O43491 1005 aaKnown RBP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 FGFR1OPO95684 399 aaKnown RBP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 LDHAP00338 332 aaKnown RBP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 NNMTP40261 264 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 TUFMP49411 452 aaKnown RBP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 CCDC15Q0P6D6 951 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 TDGQ13569 410 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 RILPL1Q5EBL4 403 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 WDR44Q5JSH3 913 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.02□□□□□ -1.617e-6■□□□□ 11.2
UBE4A-202ENST00000431736 CYB5R4Q7L1T6 521 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 DGLUCYQ7Z3D6 616 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 FAM178BQ8IXR5 827 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 CLEC4DQ8WXI8 215 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 MAP4K1Q92918 833 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 TMEM143Q96AN5 459 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 ACDQ96AP0 544 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 MKNK1Q9BUB5 465 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 FAM105AQ9NUU6 356 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 MAGEC2Q9UBF1 373 aaPredicted RBP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 KIAA1551Q9HCM1 1747 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 PIK3CDO00329 1044 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 PTPN2P17706 415 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 GRSF1Q12849 480 aaKnown RBP eCLIP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 SLC27A1Q6PCB7 646 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 C4orf50Q6ZRC1 276 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 CPA6Q8N4T0 437 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 SCFD1Q8WVM8 642 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 TTPALQ9BTX7 342 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 ATXN3LQ9H3M9 355 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 CA14Q9ULX7 337 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 UMODL1Q5DID0 1318 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 IFNAR1P17181 557 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 PDE4AP27815 886 aa5.02□□□□□ -1.61
UBE4A-202ENST00000431736 PABPC1LQ4VXU2 614 aaKnown RBP5.02□□□□□ -1.61
UBE4A-202ENST00000431736 CCDC157Q569K6 752 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms