RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 HSP90AA1P07900 732 aaKnown RBP16.45■□□□□ 0.22
RTN4-210ENST00000427710 FOXD4L6Q3SYB3 417 aaPredicted RBP16.45■□□□□ 0.22
RTN4-210ENST00000427710 TMEM119Q4V9L6 283 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 HYIQ5T013 277 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 CDCA2Q69YH5 1023 aaPredicted RBP16.45■□□□□ 0.22
RTN4-210ENST00000427710 NOTUMQ6P988 496 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 FOXD4L3Q6VB84 417 aaPredicted RBP16.45■□□□□ 0.22
RTN4-210ENST00000427710 USP49Q70CQ1 688 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 THNSL1Q8IYQ7 743 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 DAW1Q8N136 415 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 LRRC43Q8N309 656 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 SMG8Q8ND04 991 aaKnown RBP16.45■□□□□ 0.22
RTN4-210ENST00000427710 DEPTORQ8TB45 409 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 P2RX5Q93086 422 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 CLIC6Q96NY7 704 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 PCDHB12Q9Y5F1 795 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 CITO14578 2027 aa16.45■□□□□ 0.22
RTN4-210ENST00000427710 TTC28Q96AY4 2481 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 ZNF623O75123 536 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 BMP15O95972 392 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 PLA2G4BP0C869 781 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 SKIP12755 728 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 GTF2F1P35269 517 aaKnown RBP eCLIP16.44■□□□□ 0.22
RTN4-210ENST00000427710 NAMPTP43490 491 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 RAB27AP51159 221 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 PEX3P56589 373 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
RTN4-210ENST00000427710 DHX8Q14562 1220 aaKnown RBP16.44■□□□□ 0.22
RTN4-210ENST00000427710 KARSQ15046 597 aaKnown RBP16.44■□□□□ 0.22
RTN4-210ENST00000427710 C1orf186Q6ZWK4 172 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 MRPL10Q7Z7H8 261 aaKnown RBP16.44■□□□□ 0.22
RTN4-210ENST00000427710 ZBTB8OSQ8IWT0 167 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 IFT74Q96LB3 600 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 NFKBIZQ9BYH8 718 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 GBP3Q9H0R5 595 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 CSRNP2Q9H175 543 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 AAASQ9NRG9 546 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 IPPQ9Y573 584 aa16.44■□□□□ 0.22
RTN4-210ENST00000427710 XIRP2A4UGR9 3374 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 CCDC169A6NNP5 214 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 B4GALT3O60512 393 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 FGF18O76093 207 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 PRKCBP05771 671 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 ITGA4P13612 1032 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 LAG3P18627 525 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 AXLP30530 894 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 UBA7P41226 1012 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 KCNQ1P51787 676 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 SLC12A3P55017 1021 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 MAPK7Q13164 816 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 TMEM132AQ24JP5 1023 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 TIGD5Q53EQ6 642 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 NAALADL2Q58DX5 795 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 NOMO2Q5JPE7 1267 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 KCNT2Q6UVM3 1135 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 GLB1LQ6UWU2 654 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 EP400NLQ6ZTU2 488 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 ADGRD2Q7Z7M1 963 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 KIFAP3Q92845 792 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 PGBD4Q96DM1 585 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 EPSTI1Q96J88 318 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 AK8Q96MA6 479 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 CCDC113Q9H0I3 377 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 LMAN2LQ9H0V9 348 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 FZD8Q9H461 694 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 NXF3Q9H4D5 531 aaKnown RBP16.43■□□□□ 0.22
RTN4-210ENST00000427710 NSUN3Q9H649 340 aaKnown RBP16.43■□□□□ 0.22
RTN4-210ENST00000427710 IGFLR1Q9H665 355 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 NRDE2Q9H7Z3 1164 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 RSAD1Q9HA92 442 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 TBC1D13Q9NVG8 400 aa16.43■□□□□ 0.22
RTN4-210ENST00000427710 PRMT7Q9NVM4 692 aaPredicted RBP16.43■□□□□ 0.22
RTN4-210ENST00000427710 TFIP11Q9UBB9 837 aaKnown RBP16.43■□□□□ 0.22
RTN4-210ENST00000427710 FBXO2Q9UK22 296 aaPredicted RBP16.43■□□□□ 0.22
RTN4-210ENST00000427710 ZC3H11AO75152 810 aaKnown RBP eCLIP16.42■□□□□ 0.22
RTN4-210ENST00000427710 POMCP01189 267 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 PLCG1P19174 1290 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 NCLP19338 710 aaKnown RBP16.42■□□□□ 0.22
RTN4-210ENST00000427710 AKAP5P24588 427 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 LONP1P36776 959 aaKnown RBP16.42■□□□□ 0.22
RTN4-210ENST00000427710 BCAR1P56945 870 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 ERVFC1P60507 584 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 NCBP1Q09161 790 aaKnown RBP16.42■□□□□ 0.22
RTN4-210ENST00000427710 PKP1Q13835 747 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 MCM6Q14566 821 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 PPP2R5AQ15172 486 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 EEF1DP3Q658K8 133 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 ZNF280BQ86YH2 543 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 SYT2Q8N9I0 419 aaPredicted RBP16.42■□□□□ 0.22
RTN4-210ENST00000427710 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 HLA-CQ95604 372 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 CALML4Q96GE6 196 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 ZNF558Q96NG5 402 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 COL25A1Q9BXS0 654 aaPredicted RBP16.42■□□□□ 0.22
RTN4-210ENST00000427710 TRIM6Q9C030 488 aaPredicted RBP16.42■□□□□ 0.22
RTN4-210ENST00000427710 NT5C3AQ9H0P0 336 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 C2orf40Q9H1Z8 148 aa16.42■□□□□ 0.22
RTN4-210ENST00000427710 ZSCAN16Q9H4T2 348 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms