RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 STXBP4Q6ZWJ1 553 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 PALB2Q86YC2 1186 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 FMNL3Q8IVF7 1028 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 ZNF473Q8WTR7 871 aaKnown RBP15.46■□□□□ 0.07
LIG1-202ENST00000427526 CCT8L2Q96SF2 557 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 THAP2Q9H0W7 228 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 CARD9Q9H257 536 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 ZNF541Q9H0D2 1346 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 ERLIN2O94905 339 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 CCDC172P0C7W6 258 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 ARP10275 920 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 PTENP60484 403 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 BFSP1Q12934 665 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 MAPK7Q13164 816 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 EP400NLQ6ZTU2 488 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 DAW1Q8N136 415 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 MYCBPAPQ8TBZ2 947 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 ATP8B4Q8TF62 1192 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 FAM114A2Q9NRY5 505 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 COG5Q9UP83 839 aa15.46■□□□□ 0.06
LIG1-202ENST00000427526 UTP11Q9Y3A2 253 aaKnown RBP15.46■□□□□ 0.06
LIG1-202ENST00000427526 ZNF536O15090 1300 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 ANKRD62A6NC57 917 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 FOXN3O00409 490 aaPredicted RBP15.45■□□□□ 0.06
LIG1-202ENST00000427526 MYL7Q01449 175 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 MYBPC2Q14324 1141 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 RUFY4Q6ZNE9 571 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 NLRP14Q86W24 1093 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 CPXCR1Q8N123 301 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 ARFGAP2Q8N6H7 521 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 BANK1Q8NDB2 785 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 TXLNGYQ9BZA5 131 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 WDR11Q9BZH6 1224 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 FAM107AO95990 144 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 TNFAIP3P21580 790 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 HPDP32754 393 aaPredicted RBP15.45■□□□□ 0.06
LIG1-202ENST00000427526 HADHBP55084 474 aaKnown RBP15.45■□□□□ 0.06
LIG1-202ENST00000427526 UBLCP1Q8WVY7 318 aaPredicted RBP15.45■□□□□ 0.06
LIG1-202ENST00000427526 ZNF577Q9BSK1 485 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 CCPG1Q9ULG6 757 aa15.45■□□□□ 0.06
LIG1-202ENST00000427526 MEFVO15553 781 aaPredicted RBP15.44■□□□□ 0.06
LIG1-202ENST00000427526 AGBL2Q5U5Z8 902 aa15.44■□□□□ 0.06
LIG1-202ENST00000427526 YTHDF3Q7Z739 585 aaKnown RBP15.44■□□□□ 0.06
LIG1-202ENST00000427526 TMEM174Q8WUU8 243 aa15.44■□□□□ 0.06
LIG1-202ENST00000427526 KAT2BQ92831 832 aa15.44■□□□□ 0.06
LIG1-202ENST00000427526 BRCA1P38398 1863 aaKnown RBP15.44■□□□□ 0.06
LIG1-202ENST00000427526 CTNND1O60716 968 aaKnown RBP15.44■□□□□ 0.06
LIG1-202ENST00000427526 RFX1P22670 979 aa15.44■□□□□ 0.06
LIG1-202ENST00000427526 HOOK2Q96ED9 719 aa15.44■□□□□ 0.06
LIG1-202ENST00000427526 CENPHQ9H3R5 247 aa15.44■□□□□ 0.06
LIG1-202ENST00000427526 GGA2Q9UJY4 613 aa15.44■□□□□ 0.06
LIG1-202ENST00000427526 LTBP3Q9NS15 1303 aa15.44■□□□□ 0.06
LIG1-202ENST00000427526 NFIBO00712 420 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 EXOC3O60645 756 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 HIP1RO75146 1068 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 PPFIA2O75334 1257 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 DHX9Q08211 1270 aaKnown RBP15.43■□□□□ 0.06
LIG1-202ENST00000427526 MTMR2Q13614 643 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 ARHGAP44Q17R89 818 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 DUPD1Q68J44 220 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 PRPF38AQ8NAV1 312 aaKnown RBP15.43■□□□□ 0.06
LIG1-202ENST00000427526 ALG3Q92685 438 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 AGPAT1Q99943 283 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 LXNQ9BS40 222 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 TRIM51Q9BSJ1 452 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 DPH5Q9H2P9 285 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 ICAM1P05362 532 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 DLG4P78352 724 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 TCEAL1Q15170 157 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 PPP2R5EQ16537 467 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 SPDYCQ5MJ68 293 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 RDH13Q8NBN7 331 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 KIAA1683Q9H0B3 1180 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 ERVK-5Q9HDB9 667 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 ZDHHC18Q9NUE0 388 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 IPO5O00410 1097 aaKnown RBP15.43■□□□□ 0.06
LIG1-202ENST00000427526 VCAM1P19320 739 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 SETQ01105 290 aaPredicted RBP15.43■□□□□ 0.06
LIG1-202ENST00000427526 ANGEL2Q5VTE6 544 aaKnown RBP15.43■□□□□ 0.06
LIG1-202ENST00000427526 ZKSCAN4Q969J2 545 aaPredicted RBP15.43■□□□□ 0.06
LIG1-202ENST00000427526 NAP1L3Q99457 506 aaPredicted RBP15.43■□□□□ 0.06
LIG1-202ENST00000427526 RAB17Q9H0T7 212 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 RAVER2Q9HCJ3 691 aaKnown RBP15.43■□□□□ 0.06
LIG1-202ENST00000427526 HOMER2Q9NSB8 354 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 COL20A1Q9P218 1284 aa15.43■□□□□ 0.06
LIG1-202ENST00000427526 WDR46O15213 610 aaKnown RBP15.42■□□□□ 0.06
LIG1-202ENST00000427526 DR1Q01658 176 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 SPP2Q13103 211 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 SLC20A1Q8WUM9 679 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 ERP44Q9BS26 406 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 TEKT3Q9BXF9 490 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 LRRC4CQ9HCJ2 640 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 CNOT8Q9UFF9 292 aaKnown RBP15.42■□□□□ 0.06
LIG1-202ENST00000427526 ALG6Q9Y672 507 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 E7EVH7 732 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 TRAPPC3O43617 180 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 LRRN2O75325 713 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 GTF2A1P52655 376 aaPredicted RBP15.42■□□□□ 0.06
LIG1-202ENST00000427526 RHOT2Q8IXI1 618 aa15.42■□□□□ 0.06
LIG1-202ENST00000427526 SYCP3Q8IZU3 236 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms