RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 SPATA20Q8TB22 786 aa26.5■■□□□ 1.83
APOE-202ENST00000425718 MRPL4Q9BYD3 311 aaKnown RBP26.5■■□□□ 1.83
APOE-202ENST00000425718 CCDC113Q9H0I3 377 aa26.5■■□□□ 1.83
APOE-202ENST00000425718 ABHD14A-ACY1A0A1B0GW23 586 aa26.49■■□□□ 1.83
APOE-202ENST00000425718 GCNT3O95395 438 aa26.49■■□□□ 1.83
APOE-202ENST00000425718 PRR29P0C7W0 189 aa26.49■■□□□ 1.83
APOE-202ENST00000425718 TMEM132AQ24JP5 1023 aa26.49■■□□□ 1.83
APOE-202ENST00000425718 AGO3Q9H9G7 860 aaKnown RBP26.49■■□□□ 1.83
APOE-202ENST00000425718 AGPAT5Q9NUQ2 364 aa26.49■■□□□ 1.83
APOE-202ENST00000425718 ADGRA3Q8IWK6 1321 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 CASP1P29466 404 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 PPP1R2P41236 205 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 PRPF4BQ13523 1007 aaKnown RBP26.48■■□□□ 1.83
APOE-202ENST00000425718 KLHL40Q2TBA0 621 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 NT5DC1Q5TFE4 455 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 NOTUMQ6P988 496 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 TRIML1Q8N9V2 468 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 DBF4BQ8NFT6 615 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 FIZ1Q96SL8 496 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 KIFC3Q9BVG8 833 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 TMEM206Q9H813 350 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 MINDY3Q9H8M7 445 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 C1orf112Q9NSG2 853 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 PCDHA5Q9Y5H7 936 aa26.48■■□□□ 1.83
APOE-202ENST00000425718 CNTNAP2Q9UHC6 1331 aa26.47■■□□□ 1.83
APOE-202ENST00000425718 N4BP3O15049 544 aa26.47■■□□□ 1.83
APOE-202ENST00000425718 FGBP02675 491 aa26.47■■□□□ 1.83
APOE-202ENST00000425718 SKIP12755 728 aa26.47■■□□□ 1.83
APOE-202ENST00000425718 GPNMBQ14956 572 aa26.47■■□□□ 1.83
APOE-202ENST00000425718 CCDC183Q5T5S1 534 aa26.47■■□□□ 1.83
APOE-202ENST00000425718 ACCSQ96QU6 501 aa26.47■■□□□ 1.83
APOE-202ENST00000425718 ADPGKQ9BRR6 497 aa26.47■■□□□ 1.83
APOE-202ENST00000425718 KIAA1468Q9P260 1216 aa26.47■■□□□ 1.83
APOE-202ENST00000425718 TBX20Q9UMR3 447 aa26.47■■□□□ 1.83
APOE-202ENST00000425718 PPP1R37O75864 691 aa26.46■■□□□ 1.83
APOE-202ENST00000425718 NMT1P30419 496 aaKnown RBP26.46■■□□□ 1.83
APOE-202ENST00000425718 L1TD1Q5T7N2 865 aaKnown RBP26.46■■□□□ 1.83
APOE-202ENST00000425718 ZPBP2Q6X784 338 aa26.46■■□□□ 1.83
APOE-202ENST00000425718 MAP4K3Q8IVH8 894 aa26.46■■□□□ 1.83
APOE-202ENST00000425718 BICD1Q96G01 975 aa26.46■■□□□ 1.83
APOE-202ENST00000425718 TBC1D7Q9P0N9 293 aa26.46■■□□□ 1.83
APOE-202ENST00000425718 PIN4Q9Y237 131 aaKnown RBP26.46■■□□□ 1.83
APOE-202ENST00000425718 TTC3P53804 2025 aa26.45■■□□□ 1.82
APOE-202ENST00000425718 TSPAN1O60635 241 aa26.45■■□□□ 1.82
APOE-202ENST00000425718 MAGEA10P43363 369 aaPredicted RBP26.45■■□□□ 1.82
APOE-202ENST00000425718 SARSP49591 514 aaKnown RBP26.45■■□□□ 1.82
APOE-202ENST00000425718 RAB27AP51159 221 aa26.45■■□□□ 1.82
APOE-202ENST00000425718 SNRPFP62306 86 aaKnown RBP26.45■■□□□ 1.82
APOE-202ENST00000425718 HSP90AA2PQ14568 343 aaPredicted RBP26.45■■□□□ 1.82
APOE-202ENST00000425718 CAMK4Q16566 473 aa26.45■■□□□ 1.82
APOE-202ENST00000425718 TRAIPQ9BWF2 469 aa26.45■■□□□ 1.82
APOE-202ENST00000425718 STRA6Q9BX79 667 aa26.45■■□□□ 1.82
APOE-202ENST00000425718 H0YGN5 161 aa26.44■■□□□ 1.82
APOE-202ENST00000425718 CSDE1O75534 798 aaKnown RBP26.44■■□□□ 1.82
APOE-202ENST00000425718 PIGRP01833 764 aa26.44■■□□□ 1.82
APOE-202ENST00000425718 STIM1Q13586 685 aa26.44■■□□□ 1.82
APOE-202ENST00000425718 AMHR2Q16671 573 aa26.44■■□□□ 1.82
APOE-202ENST00000425718 ZNF658Q5TYW1 1059 aaPredicted RBP26.44■■□□□ 1.82
APOE-202ENST00000425718 TWF2Q6IBS0 349 aaKnown RBP26.44■■□□□ 1.82
APOE-202ENST00000425718 HACE1Q8IYU2 909 aa26.44■■□□□ 1.82
APOE-202ENST00000425718 SYCP3Q8IZU3 236 aa26.44■■□□□ 1.82
APOE-202ENST00000425718 TSPYL2Q9H2G4 693 aaPredicted RBP26.44■■□□□ 1.82
APOE-202ENST00000425718 CGNQ9P2M7 1197 aaKnown RBP26.44■■□□□ 1.82
APOE-202ENST00000425718 ARF4P18085 180 aaPredicted RBP26.43■■□□□ 1.82
APOE-202ENST00000425718 KCNJ6P48051 423 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 LIG4P49917 911 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 BMT2Q1RMZ1 405 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 DCAF4L1Q3SXM0 396 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 COBLL1Q53SF7 1204 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 ATF7IP2Q5U623 682 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 SLFN12LQ6IEE8 588 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 MYOCDQ8IZQ8 938 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 ZNF507Q8TCN5 953 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 SLC39A2Q9NP94 309 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 TNFSF13BQ9Y275 285 aa26.43■■□□□ 1.82
APOE-202ENST00000425718 A0A1B0GUA9 196 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 HNRNPDLO14979 420 aaKnown RBP26.42■■□□□ 1.82
APOE-202ENST00000425718 TOM1L1O75674 476 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 LETM1O95202 739 aaPredicted RBP26.42■■□□□ 1.82
APOE-202ENST00000425718 FGFR4P22455 802 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 BMP8BP34820 402 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 DSC3Q14574 896 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 NFKBIBQ15653 356 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 TMEM240Q5SV17 173 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 SLC27A1Q6PCB7 646 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 EPM2AIP1Q7L775 607 aaPredicted RBP26.42■■□□□ 1.82
APOE-202ENST00000425718 TAS1R3Q7RTX0 852 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 GOLGA5Q8TBA6 731 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 HERVK_113Q902F9 699 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 ACO2Q99798 780 aaKnown RBP26.42■■□□□ 1.82
APOE-202ENST00000425718 ADAM2Q99965 735 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 TRIM6Q9C030 488 aaPredicted RBP26.42■■□□□ 1.82
APOE-202ENST00000425718 RGS18Q9NS28 235 aa26.42■■□□□ 1.82
APOE-202ENST00000425718 MYBP10242 640 aa26.41■■□□□ 1.82
APOE-202ENST00000425718 ACRP10323 421 aa26.41■■□□□ 1.82
APOE-202ENST00000425718 KYAT1Q16773 422 aa26.41■■□□□ 1.82
APOE-202ENST00000425718 ZNF365Q70YC5 407 aa26.41■■□□□ 1.82
APOE-202ENST00000425718 SLC24A5Q71RS6 500 aa26.41■■□□□ 1.82
APOE-202ENST00000425718 HS2ST1Q7LGA3 356 aa26.41■■□□□ 1.82
APOE-202ENST00000425718 RSPH1Q8WYR4 309 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 321 ms