RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 UCMAQ8WVF2 138 aa9□□□□□ -0.97
CHD7-201ENST00000423902 HVCN1Q96D96 273 aa9□□□□□ -0.97
CHD7-201ENST00000423902 IGFBP4P22692 258 aa9□□□□□ -0.97
CHD7-201ENST00000423902 KRT12Q99456 494 aa9□□□□□ -0.97
CHD7-201ENST00000423902 FTHL17Q9BXU8 183 aa9□□□□□ -0.97
CHD7-201ENST00000423902 GOLGA8IPA6NC78 632 aa9□□□□□ -0.97
CHD7-201ENST00000423902 GOLGA8JA6NMD2 632 aa9□□□□□ -0.97
CHD7-201ENST00000423902 PI4K2BG5E9Z4 385 aa9□□□□□ -0.97
CHD7-201ENST00000423902 GRK4P32298 578 aa9□□□□□ -0.97
CHD7-201ENST00000423902 TRIM72Q6ZMU5 477 aa9□□□□□ -0.97
CHD7-201ENST00000423902 SEPT5Q99719 369 aaPredicted RBP9□□□□□ -0.97
CHD7-201ENST00000423902 NAPGQ99747 312 aaPredicted RBP9□□□□□ -0.97
CHD7-201ENST00000423902 H3BRB1 525 aa9□□□□□ -0.97
CHD7-201ENST00000423902 CLTAP09496 248 aa9□□□□□ -0.97
CHD7-201ENST00000423902 VAMP7P51809 220 aa9□□□□□ -0.97
CHD7-201ENST00000423902 EPHB3P54753 998 aa9□□□□□ -0.97
CHD7-201ENST00000423902 PPP1R12CQ9BZL4 782 aa9□□□□□ -0.97
CHD7-201ENST00000423902 TUT1Q9H6E5 874 aaKnown RBP9□□□□□ -0.97
CHD7-201ENST00000423902 KCNH7Q9NS40 1196 aa9□□□□□ -0.97
CHD7-201ENST00000423902 SFI1A8K8P3 1242 aa9□□□□□ -0.97
CHD7-201ENST00000423902 H2AFZP0C0S5 128 aa9□□□□□ -0.97
CHD7-201ENST00000423902 STILQ15468 1287 aa9□□□□□ -0.97
CHD7-201ENST00000423902 H2AFVQ71UI9 128 aa9□□□□□ -0.97
CHD7-201ENST00000423902 RIOX2Q8IUF8 465 aa9□□□□□ -0.97
CHD7-201ENST00000423902 P2RX7Q99572 595 aaKnown RBP9□□□□□ -0.97
CHD7-201ENST00000423902 FNDC3AQ9Y2H6 1198 aaKnown RBP9□□□□□ -0.97
CHD7-201ENST00000423902 GOLGA8SH3BPF8 625 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 BRD1O95696 1058 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 NLRP11P59045 1033 aaKnown RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 LRRC41Q15345 812 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 IFT20Q8IY31 132 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 THAP9Q9H5L6 903 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 FBXO28Q9NVF7 368 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 COL3A1P02461 1466 aaPredicted RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 C2CD2LO14523 706 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 IRF6O14896 467 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 XYLBO75191 536 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 CDK17Q00537 523 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 ZBTB16Q05516 673 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 KCNB1Q14721 858 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 APOBEC3HQ6NTF7 200 aaKnown RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 CFAP57Q96MR6 1250 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 STK39Q9UEW8 545 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 BNIP3LO60238 219 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 ACCSLQ4AC99 568 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 SGO2Q562F6 1265 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 BBOF1Q8ND07 529 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 TRIM58Q8NG06 486 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 CCHCR1Q8TD31 782 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 N4BP2L2Q92802 583 aaPredicted RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 CDK5RAP1Q96SZ6 601 aaKnown RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 ZNF638Q14966 1978 aaKnown RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 PMLP29590 882 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 ZNF653Q96CK0 615 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 JMJD4Q9H9V9 463 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 TYW1Q9NV66 732 aaKnown RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 ONECUT3O60422 494 aaPredicted RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 BTG3Q14201 252 aaPredicted RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 MFSD10Q14728 455 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 CCDC186Q7Z3E2 898 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 IFNB1P01574 187 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 TMEM35BQ8NCS4 154 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 CCNYQ8ND76 341 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 CEP63Q96MT8 703 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 HOMER3Q9NSC5 361 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 NPM3O75607 178 aaKnown RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 FGFR2P21802 821 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 RFX5P48382 616 aaPredicted RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 COPB1P53618 953 aaKnown RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 MED15Q96RN5 788 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 ASNSD1Q9NWL6 643 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 GARSP41250 739 aaKnown RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 MGAT5BQ3V5L5 792 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 ESPNB1AK53 854 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 ALDH2P05091 517 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 CDKL2Q92772 493 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 PLS3P13797 630 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 PSMA2P25787 234 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 KAZNQ674X7 775 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 SEZ6LQ9BYH1 1024 aa8.99□□□□□ -0.97
CHD7-201ENST00000423902 ALDH8A1Q9H2A2 487 aaPredicted RBP8.99□□□□□ -0.97
CHD7-201ENST00000423902 PPFIA4O75335 1185 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 CYP2C19P33261 490 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 LINC00301Q8NCQ3 95 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 TINF2Q9BSI4 451 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 ZMYND12Q9H0C1 365 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 RAB23Q9ULC3 237 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 ZC3H11AO75152 810 aaKnown RBP eCLIP8.98□□□□□ -0.97
CHD7-201ENST00000423902 PPP2R5CQ13362 524 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 TDRD10Q5VZ19 366 aaKnown RBP8.98□□□□□ -0.97
CHD7-201ENST00000423902 IFT81Q8WYA0 676 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.98□□□□□ -0.97
CHD7-201ENST00000423902 DOLKQ9UPQ8 538 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 MYH15Q9Y2K3 1946 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 DDTLA6NHG4 134 aaPredicted RBP8.98□□□□□ -0.97
CHD7-201ENST00000423902 CLEC10AQ8IUN9 316 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 ANKS4BQ8N8V4 417 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 CCDC110Q8TBZ0 833 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 SLC7A5P2Q9GIP4 190 aa8.98□□□□□ -0.97
CHD7-201ENST00000423902 NKIRAS1Q9NYS0 192 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms