RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 CNNM3Q8NE01 707 aa20.01■□□□□ 0.79
UBXN11-208ENST00000421827 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.01■□□□□ 0.79
UBXN11-208ENST00000421827 CPB2Q96IY4 423 aa20.01■□□□□ 0.79
UBXN11-208ENST00000421827 NECAB3Q96P71 396 aaPredicted RBP20.01■□□□□ 0.79
UBXN11-208ENST00000421827 TBC1D13Q9NVG8 400 aa20.01■□□□□ 0.79
UBXN11-208ENST00000421827 PUF60Q9UHX1 559 aaKnown RBP20.01■□□□□ 0.79
UBXN11-208ENST00000421827 INPP5FQ9Y2H2 1132 aa20.01■□□□□ 0.79
UBXN11-208ENST00000421827 PCDHGC5Q9Y5F6 944 aa20.01■□□□□ 0.79
UBXN11-208ENST00000421827 CNTNAP2Q9UHC6 1331 aa20.01■□□□□ 0.79
UBXN11-208ENST00000421827 NCLP19338 710 aaKnown RBP20■□□□□ 0.79
UBXN11-208ENST00000421827 CDC25AP30304 524 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 LTBRP36941 435 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 ALDH7A1P49419 539 aaKnown RBP20■□□□□ 0.79
UBXN11-208ENST00000421827 BCAR1P56945 870 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 ERVFC1P60507 584 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 KRT17Q04695 432 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 CDCA2Q69YH5 1023 aaPredicted RBP20■□□□□ 0.79
UBXN11-208ENST00000421827 PDE12Q6L8Q7 609 aaKnown RBP20■□□□□ 0.79
UBXN11-208ENST00000421827 BRAPQ7Z569 592 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 SLC39A11Q8N1S5 342 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 SMG8Q8ND04 991 aaKnown RBP20■□□□□ 0.79
UBXN11-208ENST00000421827 MMTAG2Q9BU76 263 aaKnown RBP20■□□□□ 0.79
UBXN11-208ENST00000421827 CSRNP2Q9H175 543 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 RSAD1Q9HA92 442 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 DNM3Q9UQ16 869 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 MUC3AQ02505 3323 aa20■□□□□ 0.79
UBXN11-208ENST00000421827 FSCN2O14926 492 aa19.99■□□□□ 0.79
UBXN11-208ENST00000421827 ZC3H11AO75152 810 aaKnown RBP eCLIP19.99■□□□□ 0.79
UBXN11-208ENST00000421827 ARF4P18085 180 aaPredicted RBP19.99■□□□□ 0.79
UBXN11-208ENST00000421827 PDCP20941 246 aa19.99■□□□□ 0.79
UBXN11-208ENST00000421827 NRIP1P48552 1158 aa19.99■□□□□ 0.79
UBXN11-208ENST00000421827 RNASELQ05823 741 aaKnown RBP19.99■□□□□ 0.79
UBXN11-208ENST00000421827 ADAM15Q13444 863 aa19.99■□□□□ 0.79
UBXN11-208ENST00000421827 PUS10Q3MIT2 529 aaKnown RBP19.99■□□□□ 0.79
UBXN11-208ENST00000421827 PTCRAQ6ISU1 281 aaPredicted RBP19.99■□□□□ 0.79
UBXN11-208ENST00000421827 ZBTB8OSQ8IWT0 167 aa19.99■□□□□ 0.79
UBXN11-208ENST00000421827 URGCPQ8TCY9 931 aa19.99■□□□□ 0.79
UBXN11-208ENST00000421827 BSNDQ8WZ55 320 aa19.99■□□□□ 0.79
UBXN11-208ENST00000421827 EIF2AQ9BY44 585 aaKnown RBP19.99■□□□□ 0.79
UBXN11-208ENST00000421827 C2orf40Q9H1Z8 148 aa19.99■□□□□ 0.79
UBXN11-208ENST00000421827 UBN1Q9NPG3 1134 aa19.99■□□□□ 0.79
UBXN11-208ENST00000421827 PRMT7Q9NVM4 692 aaPredicted RBP19.99■□□□□ 0.79
UBXN11-208ENST00000421827 IPPQ9Y573 584 aa19.99■□□□□ 0.79
UBXN11-208ENST00000421827 VPS37CA5D8V6 355 aaPredicted RBP19.98■□□□□ 0.79
UBXN11-208ENST00000421827 CARNS1A5YM72 827 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 VWA3AA6NCI4 1184 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 E9PMD0 336 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 B4GALT5O43286 388 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 EYA4O95677 639 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 ITGA4P13612 1032 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 ARL6IP4Q66PJ3 421 aaKnown RBP19.98■□□□□ 0.79
UBXN11-208ENST00000421827 PPP4R3CPQ6ZMV5 832 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 RBM23Q86U06 439 aaKnown RBP19.98■□□□□ 0.79
UBXN11-208ENST00000421827 EFHBQ8N7U6 833 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 PRIMPOLQ96LW4 560 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 NRDE2Q9H7Z3 1164 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 TLE6Q9H808 572 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 KANSL3Q9P2N6 904 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 GTF3C3Q9Y5Q9 886 aa19.98■□□□□ 0.79
UBXN11-208ENST00000421827 BDP1A6H8Y1 2624 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 A0A1B0GUA9 196 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 GRXCR2A6NFK2 248 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 NT5C1B-RDH14C9J2C7 533 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 LINC01565O15544 149 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 NAMPTP43490 491 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 DLX2Q07687 328 aaPredicted RBP19.97■□□□□ 0.79
UBXN11-208ENST00000421827 PPP2R5AQ15172 486 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 FAM187BQ17R55 369 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 PLPP4Q5VZY2 271 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 SLC27A1Q6PCB7 646 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 KIFAP3Q92845 792 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 TMEM169Q96HH4 297 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 IFT74Q96LB3 600 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 TCF25Q9BQ70 676 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 TRIM6Q9C030 488 aaPredicted RBP19.97■□□□□ 0.79
UBXN11-208ENST00000421827 GBP3Q9H0R5 595 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 RNF39Q9H2S5 420 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 FZD8Q9H461 694 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 POLD4Q9HCU8 107 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 NGRNQ9NPE2 291 aaKnown RBP19.97■□□□□ 0.79
UBXN11-208ENST00000421827 ENTPD7Q9NQZ7 604 aa19.97■□□□□ 0.79
UBXN11-208ENST00000421827 TBX10O75333 385 aa19.96■□□□□ 0.79
UBXN11-208ENST00000421827 GALTP07902 379 aa19.96■□□□□ 0.79
UBXN11-208ENST00000421827 AFF1P51825 1210 aaKnown RBP19.96■□□□□ 0.79
UBXN11-208ENST00000421827 ZRSR1Q15695 479 aaKnown RBP19.96■□□□□ 0.79
UBXN11-208ENST00000421827 TMC7Q7Z402 723 aa19.96■□□□□ 0.79
UBXN11-208ENST00000421827 ZNF280BQ86YH2 543 aa19.96■□□□□ 0.79
UBXN11-208ENST00000421827 HACE1Q8IYU2 909 aa19.96■□□□□ 0.79
UBXN11-208ENST00000421827 DEPTORQ8TB45 409 aa19.96■□□□□ 0.79
UBXN11-208ENST00000421827 INTS4Q96HW7 963 aaKnown RBP19.96■□□□□ 0.79
UBXN11-208ENST00000421827 HES2Q9Y543 173 aa19.96■□□□□ 0.79
UBXN11-208ENST00000421827 PER2O15055 1255 aa19.95■□□□□ 0.78
UBXN11-208ENST00000421827 NPTXRO95502 500 aa19.95■□□□□ 0.78
UBXN11-208ENST00000421827 BMP15O95972 392 aa19.95■□□□□ 0.78
UBXN11-208ENST00000421827 POMCP01189 267 aa19.95■□□□□ 0.78
UBXN11-208ENST00000421827 IL9P15248 144 aa19.95■□□□□ 0.78
UBXN11-208ENST00000421827 NDUFV1P49821 464 aa19.95■□□□□ 0.78
UBXN11-208ENST00000421827 MAPK6Q16659 721 aa19.95■□□□□ 0.78
UBXN11-208ENST00000421827 HYIQ5T013 277 aa19.95■□□□□ 0.78
UBXN11-208ENST00000421827 KCNK18Q7Z418 384 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms