RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 PSMA7O14818 248 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
TMEM53-206ENST00000420706 STX17P56962 302 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 STRN3Q13033 797 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 PAK1Q13153 545 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 AMHR2Q16671 573 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 ANKRD40Q6AI12 368 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 SYCP3Q8IZU3 236 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 CCDC155Q8N6L0 562 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 NOC4LQ9BVI4 516 aaKnown RBP13.71□□□□□ -0.21
TMEM53-206ENST00000420706 OSBPL7Q9BZF2 842 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 IKZF4Q9H2S9 585 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 RWDD2AQ9UIY3 292 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 CTNND2Q9UQB3 1225 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 USP20Q9Y2K6 914 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 NOC2LQ9Y3T9 749 aaKnown RBP13.71□□□□□ -0.21
TMEM53-206ENST00000420706 SQORQ9Y6N5 450 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 SIP14410 1827 aa13.71□□□□□ -0.22
TMEM53-206ENST00000420706 ZMYM2Q9UBW7 1377 aa13.71□□□□□ -0.22
TMEM53-206ENST00000420706 TRIM49BA6NDI0 452 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 TTLL13PA6NNM8 815 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 ANKRD63C9JTQ0 380 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 CAVIN2O95810 425 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 PIGRP01833 764 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 CLTBP09497 229 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 SELPP16109 830 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 FGFR4P22455 802 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 ZNF165P49910 485 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 PCBP1Q15365 356 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMEM53-206ENST00000420706 ZCWPW2Q504Y3 356 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 FBXO47Q5MNV8 452 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 GAS2L3Q86XJ1 694 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 ENOX1Q8TC92 643 aaKnown RBP13.7□□□□□ -0.22
TMEM53-206ENST00000420706 PRIMPOLQ96LW4 560 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 ACO2Q99798 780 aaKnown RBP13.7□□□□□ -0.22
TMEM53-206ENST00000420706 BPIFA3Q9BQP9 254 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 TARS2Q9BW92 718 aaKnown RBP13.7□□□□□ -0.22
TMEM53-206ENST00000420706 MRPL4Q9BYD3 311 aaKnown RBP13.7□□□□□ -0.22
TMEM53-206ENST00000420706 NAT10Q9H0A0 1025 aaKnown RBP13.7□□□□□ -0.22
TMEM53-206ENST00000420706 GBP3Q9H0R5 595 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 TMEM39AQ9NV64 488 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 TYW1Q9NV66 732 aaKnown RBP13.7□□□□□ -0.22
TMEM53-206ENST00000420706 TBX21Q9UL17 535 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 TRAF3IP3Q9Y228 551 aa13.7□□□□□ -0.22
TMEM53-206ENST00000420706 BICDL2A1A5D9 508 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 B4GALT5O43286 388 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 CALUO43852 315 aaPredicted RBP13.69□□□□□ -0.22
TMEM53-206ENST00000420706 RPS6KA5O75582 802 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 SNRPFP62306 86 aaKnown RBP13.69□□□□□ -0.22
TMEM53-206ENST00000420706 PRPF4BQ13523 1007 aaKnown RBP13.69□□□□□ -0.22
TMEM53-206ENST00000420706 IQCB1Q15051 598 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 TTI2Q6NXR4 508 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 SLC39A4Q6P5W5 647 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 FOXR2Q6PJQ5 311 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 ZPBP2Q6X784 338 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 LRRC8DQ7L1W4 858 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 CATSPER4Q7RTX7 472 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 FAM228AQ86W67 206 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 ZBTB45Q96K62 511 aaPredicted RBP13.69□□□□□ -0.22
TMEM53-206ENST00000420706 DUSP9Q99956 384 aaKnown RBP13.69□□□□□ -0.22
TMEM53-206ENST00000420706 HIPK3Q9H422 1215 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 AGO3Q9H9G7 860 aaKnown RBP13.69□□□□□ -0.22
TMEM53-206ENST00000420706 CBX8Q9HC52 389 aa13.69□□□□□ -0.22
TMEM53-206ENST00000420706 CGNQ9P2M7 1197 aaKnown RBP13.69□□□□□ -0.22
TMEM53-206ENST00000420706 UMODL1Q5DID0 1318 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 TISP43B9A030 160 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 RBAK-RBAKDNI3L0D1 243 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 CLIC2O15247 247 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 TSPAN1O60635 241 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 ERLIN2O94905 339 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 ARF4P18085 180 aaPredicted RBP13.68□□□□□ -0.22
TMEM53-206ENST00000420706 SFPQP23246 707 aaKnown RBP eCLIP13.68□□□□□ -0.22
TMEM53-206ENST00000420706 ADSSP30520 456 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 AXLP30530 894 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 LIG4P49917 911 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 LRRC63Q05C16 580 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 LPIN1Q14693 890 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 MBTPS1Q14703 1052 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 GPNMBQ14956 572 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 NCAPHQ15003 741 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 NFIL3Q16649 462 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 EDRF1Q3B7T1 1238 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 TSHZ1Q6ZSZ6 1077 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 HS2ST1Q7LGA3 356 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 DHX40Q8IX18 779 aaKnown RBP13.68□□□□□ -0.22
TMEM53-206ENST00000420706 USP38Q8NB14 1042 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 FAM200AQ8TCP9 573 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 BICD1Q96G01 975 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 CPB2Q96IY4 423 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 TSG101Q99816 390 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 PPP1R12CQ9BZL4 782 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 AGPAT3Q9NRZ7 376 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 TNFSF13BQ9Y275 285 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 STYXL1Q9Y6J8 313 aa13.68□□□□□ -0.22
TMEM53-206ENST00000420706 CNTNAP2Q9UHC6 1331 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 CENPFP49454 3210 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms