RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 AMHR2Q16671 573 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 PTCRAQ6ISU1 281 aaPredicted RBP18.26■□□□□ 0.51
LINC00404-201ENST00000418660 NOTUMQ6P988 496 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 SLC39A11Q8N1S5 342 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 EFHBQ8N7U6 833 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 SNX29Q8TEQ0 813 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 TBC1D13Q9NVG8 400 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 PCDHGC5Q9Y5F6 944 aa18.26■□□□□ 0.51
LINC00404-201ENST00000418660 XIRP2A4UGR9 3374 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 CNTNAP2Q9UHC6 1331 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 TCF20Q9UGU0 1960 aaKnown RBP18.25■□□□□ 0.51
LINC00404-201ENST00000418660 LRRIQ4A6NIV6 560 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 LINC01565O15544 149 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 NRIP1P48552 1158 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 ATP2C1P98194 919 aaPredicted RBP18.25■□□□□ 0.51
LINC00404-201ENST00000418660 KRT79Q5XKE5 535 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 RBM23Q86U06 439 aaKnown RBP18.25■□□□□ 0.51
LINC00404-201ENST00000418660 URGCPQ8TCY9 931 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 CPB2Q96IY4 423 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 CSRNP2Q9H175 543 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 BHMT2Q9H2M3 363 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 NRDE2Q9H7Z3 1164 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 TLE6Q9H808 572 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 RSAD1Q9HA92 442 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 UBN1Q9NPG3 1134 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 DDX19AQ9NUU7 478 aaKnown RBP18.25■□□□□ 0.51
LINC00404-201ENST00000418660 INPP5FQ9Y2H2 1132 aa18.25■□□□□ 0.51
LINC00404-201ENST00000418660 SPTBN5Q9NRC6 3674 aaKnown RBP18.25■□□□□ 0.51
LINC00404-201ENST00000418660 PP2D1A8MPX8 630 aa18.24■□□□□ 0.51
LINC00404-201ENST00000418660 ARF4P18085 180 aaPredicted RBP18.24■□□□□ 0.51
LINC00404-201ENST00000418660 RNASELQ05823 741 aaKnown RBP18.24■□□□□ 0.51
LINC00404-201ENST00000418660 DLX2Q07687 328 aaPredicted RBP18.24■□□□□ 0.51
LINC00404-201ENST00000418660 CDCA2Q69YH5 1023 aaPredicted RBP18.24■□□□□ 0.51
LINC00404-201ENST00000418660 SMG8Q8ND04 991 aaKnown RBP18.24■□□□□ 0.51
LINC00404-201ENST00000418660 TCF25Q9BQ70 676 aa18.24■□□□□ 0.51
LINC00404-201ENST00000418660 EIF2AQ9BY44 585 aaKnown RBP18.24■□□□□ 0.51
LINC00404-201ENST00000418660 C2orf40Q9H1Z8 148 aa18.24■□□□□ 0.51
LINC00404-201ENST00000418660 NGRNQ9NPE2 291 aaKnown RBP18.24■□□□□ 0.51
LINC00404-201ENST00000418660 KANSL3Q9P2N6 904 aa18.24■□□□□ 0.51
LINC00404-201ENST00000418660 DNM3Q9UQ16 869 aa18.24■□□□□ 0.51
LINC00404-201ENST00000418660 FAM50BQ9Y247 325 aa18.24■□□□□ 0.51
LINC00404-201ENST00000418660 IPPQ9Y573 584 aa18.24■□□□□ 0.51
LINC00404-201ENST00000418660 TTC28Q96AY4 2481 aa18.24■□□□□ 0.51
LINC00404-201ENST00000418660 FSD2A1L4K1 749 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 NT5C1B-RDH14C9J2C7 533 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 ZC3H11AO75152 810 aaKnown RBP eCLIP18.23■□□□□ 0.51
LINC00404-201ENST00000418660 TBX10O75333 385 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 ITGA4P13612 1032 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 IL9P15248 144 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 NDUFV1P49821 464 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 ZBTB8OSQ8IWT0 167 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 BSNDQ8WZ55 320 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 TMEM169Q96HH4 297 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 PRIMPOLQ96LW4 560 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 CDCA3Q99618 268 aaPredicted RBP18.23■□□□□ 0.51
LINC00404-201ENST00000418660 FZD8Q9H461 694 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 ENTPD7Q9NQZ7 604 aa18.23■□□□□ 0.51
LINC00404-201ENST00000418660 PRMT7Q9NVM4 692 aaPredicted RBP18.23■□□□□ 0.51
LINC00404-201ENST00000418660 MYO7AQ13402 2215 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 A0A1B0GUA9 196 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 PER2O15055 1255 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 B4GALT5O43286 388 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 EYA4O95677 639 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 GALTP07902 379 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 CDC25AP30304 524 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 NAMPTP43490 491 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 PPP2R5AQ15172 486 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 DUSP6Q16828 381 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 FAM187BQ17R55 369 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 PLPP4Q5VZY2 271 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 ARL6IP4Q66PJ3 421 aaKnown RBP18.22■□□□□ 0.51
LINC00404-201ENST00000418660 SLC27A1Q6PCB7 646 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 TMC7Q7Z402 723 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 BRAPQ7Z569 592 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 FAM178BQ8IXR5 827 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 HACE1Q8IYU2 909 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 KIFAP3Q92845 792 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 MMTAG2Q9BU76 263 aaKnown RBP18.22■□□□□ 0.51
LINC00404-201ENST00000418660 TRIM6Q9C030 488 aaPredicted RBP18.22■□□□□ 0.51
LINC00404-201ENST00000418660 GBP3Q9H0R5 595 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 RNF39Q9H2S5 420 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 DNAJB4Q9UDY4 337 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 BRWD1Q9NSI6 2320 aa18.22■□□□□ 0.51
LINC00404-201ENST00000418660 E9PMD0 336 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 INPPL1O15357 1258 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 PDCP20941 246 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 AFF1P51825 1210 aaKnown RBP18.21■□□□□ 0.51
LINC00404-201ENST00000418660 ZNF280BQ86YH2 543 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 KCTD17Q8N5Z5 321 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 IGSF21Q96ID5 467 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 MSLNLQ96KJ4 702 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 IFT74Q96LB3 600 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 FAM193BQ96PV7 902 aaPredicted RBP18.21■□□□□ 0.51
LINC00404-201ENST00000418660 TMEM175Q9BSA9 504 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 CLEC1BQ9P126 229 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 CD207Q9UJ71 328 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 HES2Q9Y543 173 aa18.21■□□□□ 0.51
LINC00404-201ENST00000418660 VWA3AA6NCI4 1184 aa18.2■□□□□ 0.5
LINC00404-201ENST00000418660 HIDE1A8MVS5 230 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms