RNA–Protein interactions for RNA: ENST00000417962.5

SHISA5-204, Transcript of shisa family member 5, humanhuman

TSL 2

Gene SHISA5, Length 2,306 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-204ENST00000417962 CBWD2Q8IUF1 395 aa20.27■□□□□ 0.84
SHISA5-204ENST00000417962 ELP3Q9H9T3 547 aa20.27■□□□□ 0.84
SHISA5-204ENST00000417962 UBE2TQ9NPD8 197 aaPredicted RBP20.27■□□□□ 0.84
SHISA5-204ENST00000417962 EHD2Q9NZN4 543 aa20.27■□□□□ 0.84
SHISA5-204ENST00000417962 MXI1P50539 228 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 RTP1P59025 263 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 MTERF2Q49AM1 385 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 GLYCTKQ8IVS8 523 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 UPF1Q92900 1129 aaKnown RBP eCLIP20.26■□□□□ 0.832e-12■■■■■ 45.3
SHISA5-204ENST00000417962 SAAL1Q96ER3 474 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 FHDC1Q9C0D6 1143 aaPredicted RBP20.26■□□□□ 0.83
SHISA5-204ENST00000417962 SMARCAL1Q9NZC9 954 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 RNF14Q9UBS8 474 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 FOXN3O00409 490 aaPredicted RBP20.26■□□□□ 0.83
SHISA5-204ENST00000417962 IRF6O14896 467 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 LRRN2O75325 713 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 DNA2P51530 1060 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 CFAP221Q4G0U5 840 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 NCAPG2Q86XI2 1143 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 OLIG1Q8TAK6 271 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 VTI1AQ96AJ9 217 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 OTUD5Q96G74 571 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 IFT74Q96LB3 600 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 SPATC1LQ9H0A9 340 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 TMEM117Q9H0C3 514 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 ZNF302Q9NR11 478 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 ST7Q9NRC1 585 aa20.26■□□□□ 0.83
SHISA5-204ENST00000417962 PACSIN2Q9UNF0 486 aaPredicted RBP20.26■□□□□ 0.83
SHISA5-204ENST00000417962 ADGRA3Q8IWK6 1321 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 PPATQ06203 517 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 ARHGEF19Q8IW93 802 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 PROCA1Q8NCQ7 364 aaPredicted RBP20.25■□□□□ 0.83
SHISA5-204ENST00000417962 SYT11Q9BT88 431 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 POLR3FQ9H1D9 316 aaPredicted RBP20.25■□□□□ 0.83
SHISA5-204ENST00000417962 SUGCTQ9HAC7 445 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 SYNGAP1Q96PV0 1343 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 A0A0A6YYK5 440 aaPredicted RBP20.25■□□□□ 0.83
SHISA5-204ENST00000417962 TULP1O00294 542 aaPredicted RBP20.25■□□□□ 0.83
SHISA5-204ENST00000417962 PMM2O15305 246 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 ATG7O95352 703 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 MATR3P43243 847 aaKnown RBP eCLIP20.25■□□□□ 0.83
SHISA5-204ENST00000417962 MCCD1P59942 119 aaPredicted RBP20.25■□□□□ 0.83
SHISA5-204ENST00000417962 IRX3P78415 501 aaPredicted RBP20.25■□□□□ 0.83
SHISA5-204ENST00000417962 KIF22Q14807 665 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 SLC39A4Q6P5W5 647 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 MS4A14Q96JA4 679 aa20.25■□□□□ 0.83
SHISA5-204ENST00000417962 A0A0G2JLL6 359 aaPredicted RBP20.24■□□□□ 0.83
SHISA5-204ENST00000417962 GALCP54803 685 aa20.24■□□□□ 0.83
SHISA5-204ENST00000417962 SMC1AQ14683 1233 aaKnown RBP20.24■□□□□ 0.83
SHISA5-204ENST00000417962 PRRT2Q7Z6L0 340 aaPredicted RBP20.24■□□□□ 0.83
SHISA5-204ENST00000417962 ZNF526Q8TF50 670 aaPredicted RBP20.24■□□□□ 0.83
SHISA5-204ENST00000417962 POMGNT1Q8WZA1 660 aa20.24■□□□□ 0.83
SHISA5-204ENST00000417962 CCDC127Q96BQ5 260 aa20.24■□□□□ 0.83
SHISA5-204ENST00000417962 PAGR1Q9BTK6 254 aa20.24■□□□□ 0.83
SHISA5-204ENST00000417962 MAFBQ9Y5Q3 323 aaPredicted RBP20.24■□□□□ 0.83
SHISA5-204ENST00000417962 HNRNPDLO14979 420 aaKnown RBP20.24■□□□□ 0.83
SHISA5-204ENST00000417962 TNFAIP3P21580 790 aa20.24■□□□□ 0.83
SHISA5-204ENST00000417962 POLGP54098 1239 aaPredicted RBP20.24■□□□□ 0.83
SHISA5-204ENST00000417962 EMC2Q15006 297 aa20.24■□□□□ 0.83
SHISA5-204ENST00000417962 MAP9Q49MG5 647 aa20.24■□□□□ 0.83
SHISA5-204ENST00000417962 TPCN2Q8NHX9 752 aa20.24■□□□□ 0.83
SHISA5-204ENST00000417962 PARD3BQ8TEW8 1205 aa20.24■□□□□ 0.83
SHISA5-204ENST00000417962 H0YCG3 227 aa20.23■□□□□ 0.83
SHISA5-204ENST00000417962 OATP04181 439 aa20.23■□□□□ 0.83
SHISA5-204ENST00000417962 ATP4AP20648 1035 aa20.23■□□□□ 0.83
SHISA5-204ENST00000417962 MAP2K1Q02750 393 aaPredicted RBP20.23■□□□□ 0.83
SHISA5-204ENST00000417962 RPS6KA1Q15418 735 aa20.23■□□□□ 0.83
SHISA5-204ENST00000417962 ERO1BQ86YB8 467 aa20.23■□□□□ 0.83
SHISA5-204ENST00000417962 LRRC57Q8N9N7 239 aa20.23■□□□□ 0.83
SHISA5-204ENST00000417962 LMBR1Q8WVP7 490 aa20.23■□□□□ 0.83
SHISA5-204ENST00000417962 TAF4BQ92750 862 aa20.23■□□□□ 0.83
SHISA5-204ENST00000417962 CLMNQ96JQ2 1002 aa20.23■□□□□ 0.83
SHISA5-204ENST00000417962 FBXL18Q96ME1 805 aa20.23■□□□□ 0.83
SHISA5-204ENST00000417962 SOWAHBA6NEL2 793 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 TMCO5BA8MYB1 307 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 ZMYND10O75800 440 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 BRDTQ58F21 947 aaPredicted RBP20.22■□□□□ 0.83
SHISA5-204ENST00000417962 KRT39Q6A163 491 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 ANKRD13AQ8IZ07 590 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 BICD1Q96G01 975 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 LRRC1Q9BTT6 524 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 SEPT11Q9NVA2 429 aaKnown RBP20.22■□□□□ 0.83
SHISA5-204ENST00000417962 ARHGAP28Q9P2N2 729 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 LRRIQ3A6PVS8 624 aaPredicted RBP20.22■□□□□ 0.83
SHISA5-204ENST00000417962 UBA1P22314 1058 aaKnown RBP20.22■□□□□ 0.83
SHISA5-204ENST00000417962 ABCD1P33897 745 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 CASP8Q14790 479 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 MSL3Q8N5Y2 521 aaKnown RBP20.22■□□□□ 0.83
SHISA5-204ENST00000417962 TMC2Q8TDI7 906 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 MFSD14AQ96MC6 490 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 AGPAT1Q99943 283 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 GOLPH3Q9H4A6 298 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 KCNG1Q9UIX4 513 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 USP20Q9Y2K6 914 aa20.22■□□□□ 0.83
SHISA5-204ENST00000417962 KIF4AO95239 1232 aa20.21■□□□□ 0.83
SHISA5-204ENST00000417962 TMEM253P0C7T8 217 aa20.21■□□□□ 0.83
SHISA5-204ENST00000417962 GARTP22102 1010 aa20.21■□□□□ 0.83
SHISA5-204ENST00000417962 EDNRBP24530 442 aa20.21■□□□□ 0.83
SHISA5-204ENST00000417962 NF2P35240 595 aa20.21■□□□□ 0.83
SHISA5-204ENST00000417962 TAS1R3Q7RTX0 852 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms