RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ERLIN2O94905 339 aa28.18■■■□□ 2.1
VEGFA-208ENST00000417285 CXCL14O95715 111 aa28.18■■■□□ 2.1
VEGFA-208ENST00000417285 MCM7P33993 719 aa28.18■■■□□ 2.1
VEGFA-208ENST00000417285 GIT2Q14161 759 aa28.18■■■□□ 2.1
VEGFA-208ENST00000417285 ANKRD54Q6NXT1 300 aa28.18■■■□□ 2.1
VEGFA-208ENST00000417285 DDX53Q86TM3 631 aaKnown RBP28.18■■■□□ 2.1
VEGFA-208ENST00000417285 IFNLR1Q8IU57 520 aaPredicted RBP28.18■■■□□ 2.1
VEGFA-208ENST00000417285 RNF135Q8IUD6 432 aa28.18■■■□□ 2.1
VEGFA-208ENST00000417285 CCDC51Q96ER9 411 aa28.18■■■□□ 2.1
VEGFA-208ENST00000417285 PHF7Q9BWX1 381 aaPredicted RBP28.18■■■□□ 2.1
VEGFA-208ENST00000417285 NRDE2Q9H7Z3 1164 aa28.18■■■□□ 2.1
VEGFA-208ENST00000417285 INPP5FQ9Y2H2 1132 aa28.18■■■□□ 2.1
VEGFA-208ENST00000417285 WNT7AO00755 349 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 GALTP07902 379 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 ATP2B1P20020 1258 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 ARL2P36404 184 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 TECP42680 631 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 RBM10P98175 930 aaKnown RBP28.17■■■□□ 2.1
VEGFA-208ENST00000417285 RABEP1Q15276 862 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 HERC4Q5GLZ8 1057 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-208ENST00000417285 AGMOQ6ZNB7 445 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 VPS52Q8N1B4 723 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 SUSD6Q92537 303 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 IGSF21Q96ID5 467 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 RSAD1Q9HA92 442 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 TUFT1Q9NNX1 390 aa28.17■■■□□ 2.1
VEGFA-208ENST00000417285 TRIOO75962 3097 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 MEIS3P2A8K0S8 358 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 LOC730098B7Z3J9 87 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 NCLP19338 710 aaKnown RBP28.16■■■□□ 2.1
VEGFA-208ENST00000417285 RARRES1P49788 294 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 GNL2Q13823 731 aaKnown RBP28.16■■■□□ 2.1
VEGFA-208ENST00000417285 UBXN11Q5T124 520 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 TMEM87AQ8NBN3 555 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 FBXO18Q8NFZ0 1043 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 CASP10Q92851 521 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 NFKBIZQ9BYH8 718 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 S1PR5Q9H228 398 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 TMEM60Q9H2L4 133 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 UPF2Q9HAU5 1272 aaKnown RBP28.16■■■□□ 2.1
VEGFA-208ENST00000417285 IRAK3Q9Y616 596 aa28.16■■■□□ 2.1
VEGFA-208ENST00000417285 ALDH2P05091 517 aa28.15■■■□□ 2.1
VEGFA-208ENST00000417285 CBX2Q14781 532 aaPredicted RBP28.15■■■□□ 2.1
VEGFA-208ENST00000417285 NOTUMQ6P988 496 aa28.15■■■□□ 2.1
VEGFA-208ENST00000417285 PIGOQ8TEQ8 1089 aa28.15■■■□□ 2.1
VEGFA-208ENST00000417285 FAM193BQ96PV7 902 aaPredicted RBP28.15■■■□□ 2.1
VEGFA-208ENST00000417285 NACC1Q96RE7 527 aa28.15■■■□□ 2.1
VEGFA-208ENST00000417285 INO80B-WBP1J3KQ70 363 aa28.14■■■□□ 2.1
VEGFA-208ENST00000417285 ST18O60284 1047 aa28.14■■■□□ 2.1
VEGFA-208ENST00000417285 SPATA31C1P0DKV0 1188 aa28.14■■■□□ 2.1
VEGFA-208ENST00000417285 TPRNQ4KMQ1 711 aa28.14■■■□□ 2.1
VEGFA-208ENST00000417285 LLGL2Q6P1M3 1020 aa28.14■■■□□ 2.1
VEGFA-208ENST00000417285 ERMNQ8TAM6 284 aa28.14■■■□□ 2.1
VEGFA-208ENST00000417285 TMEM175Q9BSA9 504 aa28.14■■■□□ 2.1
VEGFA-208ENST00000417285 POLR3CQ9BUI4 534 aaPredicted RBP28.14■■■□□ 2.1
VEGFA-208ENST00000417285 DBR1Q9UK59 544 aaKnown RBP28.14■■■□□ 2.1
VEGFA-208ENST00000417285 POTEMA6NI47 508 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 TSPAN1O60635 241 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 CTSAP10619 480 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 ITGA4P13612 1032 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 TRAPPC10P48553 1259 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 SYCE2Q6PIF2 218 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 CATSPER3Q86XQ3 398 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 ZNF280BQ86YH2 543 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 ASAP3Q8TDY4 903 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 GBP3Q9H0R5 595 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 ZBP1Q9H171 429 aa28.13■■■□□ 2.09
VEGFA-208ENST00000417285 CLASP2O75122 1294 aaKnown RBP28.12■■■□□ 2.09
VEGFA-208ENST00000417285 SLC11A1P49279 550 aa28.12■■■□□ 2.09
VEGFA-208ENST00000417285 CAPSQ13938 189 aa28.12■■■□□ 2.09
VEGFA-208ENST00000417285 ZNF174Q15697 407 aa28.12■■■□□ 2.09
VEGFA-208ENST00000417285 SMG8Q8ND04 991 aaKnown RBP28.12■■■□□ 2.09
VEGFA-208ENST00000417285 MCPH1Q8NEM0 835 aa28.12■■■□□ 2.09
VEGFA-208ENST00000417285 FAM122AQ96E09 287 aa28.12■■■□□ 2.09
VEGFA-208ENST00000417285 CSRNP2Q9H175 543 aa28.12■■■□□ 2.09
VEGFA-208ENST00000417285 DNAJB4Q9UDY4 337 aa28.12■■■□□ 2.09
VEGFA-208ENST00000417285 MUTYHQ9UIF7 546 aa28.12■■■□□ 2.09
VEGFA-208ENST00000417285 OR52Z1P0C646 297 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 GLRA2P23416 452 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 CA8P35219 290 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 MBTD1Q05BQ5 628 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 ITIH3Q06033 890 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 CES5AQ6NT32 575 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 TMEM173Q86WV6 379 aaPredicted RBP28.11■■■□□ 2.09
VEGFA-208ENST00000417285 NOSTRINQ8IVI9 506 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 HACE1Q8IYU2 909 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 FAN1Q9Y2M0 1017 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 IPPQ9Y573 584 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 HCFC2Q9Y5Z7 792 aa28.11■■■□□ 2.09
VEGFA-208ENST00000417285 INPPL1O15357 1258 aa28.1■■■□□ 2.09
VEGFA-208ENST00000417285 DDHD2O94830 711 aa28.1■■■□□ 2.09
VEGFA-208ENST00000417285 MUTP22033 750 aa28.1■■■□□ 2.09
VEGFA-208ENST00000417285 RPA1P27694 616 aa28.1■■■□□ 2.09
VEGFA-208ENST00000417285 PLA2G5P39877 138 aa28.1■■■□□ 2.09
VEGFA-208ENST00000417285 EDAQ92838 391 aa28.1■■■□□ 2.09
VEGFA-208ENST00000417285 RPGRIP1Q96KN7 1286 aa28.1■■■□□ 2.09
VEGFA-208ENST00000417285 POLR3FQ9H1D9 316 aaPredicted RBP28.1■■■□□ 2.09
VEGFA-208ENST00000417285 NOL7Q9UMY1 257 aaKnown RBP28.1■■■□□ 2.09
VEGFA-208ENST00000417285 KIF3AQ9Y496 699 aa28.1■■■□□ 2.09
VEGFA-208ENST00000417285 A0A087WWV3 80 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms