RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 AGMOQ6ZNB7 445 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 CNNM3Q8NE01 707 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 CCDC51Q96ER9 411 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 BHMT2Q9H2M3 363 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 DDX19AQ9NUU7 478 aaKnown RBP17.32■□□□□ 0.36
ITGB1-204ENST00000417122 TBC1D13Q9NVG8 400 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 SPG21Q9NZD8 308 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 PCDHGC5Q9Y5F6 944 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 CNTNAP2Q9UHC6 1331 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 LINC01565O15544 149 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 ZC3H11AO75152 810 aaKnown RBP eCLIP17.31■□□□□ 0.36
ITGB1-204ENST00000417122 ARF4P18085 180 aaPredicted RBP17.31■□□□□ 0.36
ITGB1-204ENST00000417122 NCLP19338 710 aaKnown RBP17.31■□□□□ 0.36
ITGB1-204ENST00000417122 CDC25AP30304 524 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 NRIP1P48552 1158 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 ADAM15Q13444 863 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 AMHR2Q16671 573 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 PUS10Q3MIT2 529 aaKnown RBP17.31■□□□□ 0.36
ITGB1-204ENST00000417122 PTCRAQ6ISU1 281 aaPredicted RBP17.31■□□□□ 0.36
ITGB1-204ENST00000417122 PDE12Q6L8Q7 609 aaKnown RBP17.31■□□□□ 0.36
ITGB1-204ENST00000417122 RBM23Q86U06 439 aaKnown RBP17.31■□□□□ 0.36
ITGB1-204ENST00000417122 ZBTB8OSQ8IWT0 167 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 SLC39A11Q8N1S5 342 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 SMG8Q8ND04 991 aaKnown RBP17.31■□□□□ 0.36
ITGB1-204ENST00000417122 URGCPQ8TCY9 931 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 EIF2AQ9BY44 585 aaKnown RBP17.31■□□□□ 0.36
ITGB1-204ENST00000417122 CSRNP2Q9H175 543 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 RSAD1Q9HA92 442 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 IPPQ9Y573 584 aa17.31■□□□□ 0.36
ITGB1-204ENST00000417122 GRXCR2A6NFK2 248 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 NT5C1B-RDH14C9J2C7 533 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 E9PMD0 336 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 FSCN2O14926 492 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 ITGA4P13612 1032 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 RNASELQ05823 741 aaKnown RBP17.3■□□□□ 0.36
ITGB1-204ENST00000417122 DLX2Q07687 328 aaPredicted RBP17.3■□□□□ 0.36
ITGB1-204ENST00000417122 CDCA2Q69YH5 1023 aaPredicted RBP17.3■□□□□ 0.36
ITGB1-204ENST00000417122 BSNDQ8WZ55 320 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 TCF25Q9BQ70 676 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 NRDE2Q9H7Z3 1164 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 TLE6Q9H808 572 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 ENTPD7Q9NQZ7 604 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 PRMT7Q9NVM4 692 aaPredicted RBP17.3■□□□□ 0.36
ITGB1-204ENST00000417122 DNM3Q9UQ16 869 aa17.3■□□□□ 0.36
ITGB1-204ENST00000417122 BRWD1Q9NSI6 2320 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 CARNS1A5YM72 827 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 B4GALT5O43286 388 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 EYA4O95677 639 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 IL9P15248 144 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 NAMPTP43490 491 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 NDUFV1P49821 464 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 PPP2R5AQ15172 486 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 PLPP4Q5VZY2 271 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 BRAPQ7Z569 592 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 EFHBQ8N7U6 833 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 PRIMPOLQ96LW4 560 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 MMTAG2Q9BU76 263 aaKnown RBP17.29■□□□□ 0.36
ITGB1-204ENST00000417122 TRIM6Q9C030 488 aaPredicted RBP17.29■□□□□ 0.36
ITGB1-204ENST00000417122 C2orf40Q9H1Z8 148 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 NGRNQ9NPE2 291 aaKnown RBP17.29■□□□□ 0.36
ITGB1-204ENST00000417122 UBN1Q9NPG3 1134 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 KANSL3Q9P2N6 904 aa17.29■□□□□ 0.36
ITGB1-204ENST00000417122 A0A1B0GUA9 196 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 VPS37CA5D8V6 355 aaPredicted RBP17.28■□□□□ 0.36
ITGB1-204ENST00000417122 VWA3AA6NCI4 1184 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 PER2O15055 1255 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 TBX10O75333 385 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 GALTP07902 379 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 AFF1P51825 1210 aaKnown RBP17.28■□□□□ 0.36
ITGB1-204ENST00000417122 FAM187BQ17R55 369 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 ARL6IP4Q66PJ3 421 aaKnown RBP17.28■□□□□ 0.36
ITGB1-204ENST00000417122 SLC27A1Q6PCB7 646 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 TMC7Q7Z402 723 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 CDR2LQ86X02 465 aaPredicted RBP17.28■□□□□ 0.36
ITGB1-204ENST00000417122 ZNF280BQ86YH2 543 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 DEPTORQ8TB45 409 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 KIFAP3Q92845 792 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 TMEM169Q96HH4 297 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 IFT74Q96LB3 600 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 FAM193BQ96PV7 902 aaPredicted RBP17.28■□□□□ 0.36
ITGB1-204ENST00000417122 CDCA3Q99618 268 aaPredicted RBP17.28■□□□□ 0.36
ITGB1-204ENST00000417122 GBP3Q9H0R5 595 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 FZD8Q9H461 694 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 POLD4Q9HCU8 107 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 DNAJB4Q9UDY4 337 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 FAM50BQ9Y247 325 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 HES2Q9Y543 173 aa17.28■□□□□ 0.36
ITGB1-204ENST00000417122 DDHD2O94830 711 aa17.27■□□□□ 0.36
ITGB1-204ENST00000417122 NPTXRO95502 500 aa17.27■□□□□ 0.36
ITGB1-204ENST00000417122 POMCP01189 267 aa17.27■□□□□ 0.36
ITGB1-204ENST00000417122 PDCP20941 246 aa17.27■□□□□ 0.36
ITGB1-204ENST00000417122 ZRSR1Q15695 479 aaKnown RBP17.27■□□□□ 0.36
ITGB1-204ENST00000417122 CLUL1Q15846 466 aa17.27■□□□□ 0.36
ITGB1-204ENST00000417122 MAPK6Q16659 721 aa17.27■□□□□ 0.36
ITGB1-204ENST00000417122 DUSP6Q16828 381 aa17.27■□□□□ 0.36
ITGB1-204ENST00000417122 HACE1Q8IYU2 909 aa17.27■□□□□ 0.36
ITGB1-204ENST00000417122 IGSF21Q96ID5 467 aa17.27■□□□□ 0.36
ITGB1-204ENST00000417122 APOL6Q9BWW8 343 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms