RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 MATR3P43243 847 aaKnown RBP eCLIP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 GRIA4P48058 902 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 TKTL1P51854 596 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 SLC16A1P53985 500 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 RRP1P56182 461 aaKnown RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 NLRP5P59047 1200 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 IFI35P80217 286 aaPredicted RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 YWHAHQ04917 246 aaPredicted RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 UBE3AQ05086 875 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 KLHL30Q0D2K2 578 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 LRMPQ12912 555 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 MAMLD1Q13495 774 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 SNX17Q15036 470 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 PPP1R7Q15435 360 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ARHGAP44Q17R89 818 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ANKRD39Q53RE8 183 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 HSP90AA5PQ58FG0 334 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 GNASQ5JWF2 1037 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 C10orf76Q5T2E6 689 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ATPAF1Q5TC12 328 aaPredicted RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 STYK1Q6J9G0 422 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ACAD10Q6JQN1 1059 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 LIN54Q6MZP7 749 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 OLFM4Q6UX06 510 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 GBP6Q6ZN66 633 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 BICDL1Q6ZP65 573 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 NUP54Q7Z3B4 507 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 NCAPG2Q86XI2 1143 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 C2CD5Q86YS7 1000 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ZC3H7AQ8IWR0 971 aaKnown RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 THNSL1Q8IYQ7 743 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ZNF295-AS1Q8N0V1 137 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 TAGAPQ8N103 731 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 LRRC43Q8N309 656 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 TMEM57Q8N5G2 664 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 UHMK1Q8TAS1 419 aaKnown RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ETNPPLQ8TBG4 499 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 DDX54Q8TDD1 881 aaKnown RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 PANK1Q8TE04 598 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 RHBDD1Q8TEB9 315 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 PIGOQ8TEQ8 1089 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 DCAF4Q8WV16 495 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ZFAND2BQ8WV99 257 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 STON2Q8WXE9 905 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 HERVK_113Q902F9 699 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 TTC9Q92623 222 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 MUL1Q969V5 352 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 GAL3ST3Q96A11 431 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 EXOC4Q96A65 974 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ZUFSPQ96AP4 578 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 CALML4Q96GE6 196 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 RMDN2Q96LZ7 410 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ZDHHC15Q96MV8 337 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 COG8Q96MW5 612 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ACAP3Q96P50 834 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 NOX5Q96PH1 765 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ALPK1Q96QP1 1244 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 FNBP1Q96RU3 617 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ZKSCAN3Q9BRR0 538 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 ALG1Q9BT22 464 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 EIF2AQ9BY44 585 aaKnown RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 STK33Q9BYT3 514 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 PAIP1Q9H074 479 aaKnown RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 C1orf21Q9H246 121 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 CLSTN2Q9H4D0 955 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 SAYSD1Q9NPB0 183 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 TCF7L2Q9NQB0 619 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 PRDM9Q9NQV7 894 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 RXFP3Q9NSD7 469 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 CCM2LQ9NUG4 571 aaPredicted RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 DNAJC28Q9NX36 388 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 MCM9Q9NXL9 1143 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 UBA2Q9UBT2 640 aaPredicted RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 MORF4L1Q9UBU8 362 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 REV1Q9UBZ9 1251 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 SRP68Q9UHB9 627 aaKnown RBP3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 CLCA2Q9UQC9 943 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 PCDHGB5Q9Y5G0 923 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 PCDHA9Q9Y5H5 950 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 HRH3Q9Y5N1 445 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 GPR45Q9Y5Y3 372 aa3.44□□□□□ -1.86
CTDSPL-203ENST00000416688 CLRN2A0PK11 232 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 PTPDC1A2A3K4 754 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 KRT87PA6NCN2 255 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 WDR64B1ANS9 1081 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 UBXN8O00124 270 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 AP3B1O00203 1094 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 CACNB4O00305 520 aaPredicted RBP3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 NPC1O15118 1278 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 POLR3GO15318 223 aaPredicted RBP3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 PRPSAP2O60256 369 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 KERAO60938 352 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 LILRA1O75019 489 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 PTP4A3O75365 173 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 DLGAP3O95886 979 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 ALDH1A1P00352 501 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 HEXBP07686 556 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 MMEP08473 750 aa3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 SNRNP70P08621 437 aaKnown RBP3.43□□□□□ -1.86
CTDSPL-203ENST00000416688 TMIGD3P0DMS9 266 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms