RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 PADI6Q6TGC4 694 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 SFR1Q86XK3 245 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 CCDC65Q8IXS2 484 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 DAW1Q8N136 415 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 ZNF710Q8N1W2 664 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 CCDC47Q96A33 483 aaKnown RBP10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 RAD9AQ99638 391 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 FTHL17Q9BXU8 183 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 SAMSN1Q9NSI8 373 aaKnown RBP10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 RWDD2AQ9UIY3 292 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 INSL6Q9Y581 213 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 TRPV2Q9Y5S1 764 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 WDR81Q562E7 1941 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 TET1Q8NFU7 2136 aa10.16□□□□□ -0.78
CHRNA1-206ENST00000416004 SMIM35A0A1B0GVV1 85 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 USO1O60763 962 aaKnown RBP10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 CA3P07451 260 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 ZNF18P17022 549 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 KLRC1P26715 233 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 PRKCEQ02156 737 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 HIC1Q14526 733 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 SPATA1Q5VX52 437 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 MTHFD1LQ6UB35 978 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 TSHZ1Q6ZSZ6 1077 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 MAEAQ7L5Y9 396 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 WNT8BQ93098 351 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 PRDM12Q9H4Q4 367 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 ANKEF1Q9NU02 776 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 MAFBQ9Y5Q3 323 aaPredicted RBP10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 CDY2AQ9Y6F7 541 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 SQORQ9Y6N5 450 aa10.15□□□□□ -0.78
CHRNA1-206ENST00000416004 EVPLQ92817 2033 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 GHRP10912 638 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 GUCY2CP25092 1073 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 DNM2P50570 870 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 ZNF75DP51815 510 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 PAK2Q13177 524 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 PSMD2Q13200 908 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 GRIN2CQ14957 1233 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 COBLL1Q53SF7 1204 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 XKR9Q5GH70 373 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 TTI2Q6NXR4 508 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 SARM1Q6SZW1 724 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 RUFY4Q6ZNE9 571 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 EXOC8Q8IYI6 725 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 METTL13Q8N6R0 699 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 YME1L1Q96TA2 773 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 DUSP9Q99956 384 aaKnown RBP10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 JPH2Q9BR39 696 aaPredicted RBP10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 ZKSCAN5Q9Y2L8 839 aa10.15□□□□□ -0.79
CHRNA1-206ENST00000416004 PSMA7O14818 248 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 HIP1RO75146 1068 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 TBCAO75347 108 aaKnown RBP10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 FAM13AO94988 1023 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 GJB5O95377 273 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 OATP04181 439 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 HOXD13P35453 343 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 ZNF131P52739 623 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 CDC42EP1Q00587 391 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 ANKRD40Q6AI12 368 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 FAM117BQ6P1L5 589 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 GUF1Q8N442 669 aaKnown RBP10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 SCFD1Q8WVM8 642 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 P2RX5Q93086 422 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 EEF2KMTQ96G04 330 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 DHTKD1Q96HY7 919 aaPredicted RBP10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 SCLT1Q96NL6 688 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 FIZ1Q96SL8 496 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 CELF4Q9BZC1 486 aaKnown RBP10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 TRIM5Q9C035 493 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 GPRC5CQ9NQ84 441 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 KCND2Q9NZV8 630 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 SEPT9Q9UHD8 586 aaPredicted RBP10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 GINS2Q9Y248 185 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 YBX2Q9Y2T7 364 aaKnown RBP10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 LOXHD1Q8IVV2 1947 aa10.14□□□□□ -0.79
CHRNA1-206ENST00000416004 UPP2O95045 317 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 STAG3L1P0CL83 205 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 MYBP10242 640 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 CCNE1P24864 410 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 DEFB103AP81534 67 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 FANCCQ00597 558 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 TBC1D8BQ0IIM8 1120 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 STIM1Q13586 685 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 XKR3Q5GH77 459 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 MARCH8Q5T0T0 291 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 CDKAL1Q5VV42 579 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 CENPPQ6IPU0 288 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 TRAF7Q6Q0C0 670 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 EPM2AIP1Q7L775 607 aaPredicted RBP10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 IRF2BP1Q8IU81 584 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 TRAPPC12Q8WVT3 735 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 CEP170P1Q96L14 293 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 CCDC43Q96MW1 224 aaKnown RBP10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 SAMD11Q96NU1 681 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 PARVGQ9HBI0 331 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 LRFN2Q9ULH4 789 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 ODF2LQ9ULJ1 636 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 AKT3Q9Y243 479 aa10.13□□□□□ -0.79
CHRNA1-206ENST00000416004 COL4A3BPQ9Y5P4 624 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms