RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 FTLP02792 175 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 DRG2P55039 364 aaKnown RBP20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 MYBPC2Q14324 1141 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 SWT1Q5T5J6 900 aaKnown RBP20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 CPLX4Q7Z7G2 160 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 VTI1AQ96AJ9 217 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 TDRD3Q9H7E2 651 aaKnown RBP20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 ARHGEF10LQ9HCE6 1279 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 TMEM110-MUSTN1A8MSY1 372 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 BACH1O14867 736 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 KIAA0391O15091 583 aaKnown RBP20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 ECE2O60344 883 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 CHRNA3P32297 505 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 PDE6BP35913 854 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 GKAP1Q5VSY0 366 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 INTS8Q75QN2 995 aaKnown RBP20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 TATDN2Q93075 761 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 C18orf8Q96DM3 657 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 MASTLQ96GX5 879 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 CSRNP1Q96S65 589 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 PNMA2Q9UL42 364 aa20.51■□□□□ 0.87
TNFRSF8-202ENST00000413146 ENTPD3O75355 529 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 SHBGP04278 402 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 BYSLQ13895 437 aaKnown RBP20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 RRP1BQ14684 758 aaKnown RBP20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 AADACL2Q6P093 401 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 FBXO25Q8TCJ0 367 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 ZSWIM1Q9BR11 485 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 STRA6Q9BX79 667 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 EPB41L4BQ9H329 900 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 CCDC169A6NNP5 214 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 ARP10275 920 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 GBP1P32455 592 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 ECE1P42892 770 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 SMTNP53814 917 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 GPC5P78333 572 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 DLG4P78352 724 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 SEL1L2Q5TEA6 688 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 ZDHHC24Q6UX98 284 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 ARHGEF19Q8IW93 802 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 RPUSD2Q8IZ73 545 aaKnown RBP20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 KRT35Q92764 455 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 PCIF1Q9H4Z3 704 aa20.5■□□□□ 0.87
TNFRSF8-202ENST00000413146 VIL1P09327 827 aaKnown RBP20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 VAMP7P51809 220 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 CCDC114Q96M63 670 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 XPO6Q96QU8 1125 aaKnown RBP20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 MTRF1LQ9UGC7 380 aaKnown RBP20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 PARP2Q9UGN5 583 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 BCS1LQ9Y276 419 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 DAW1Q8N136 415 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 MDM1Q8TC05 714 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 CENPTQ96BT3 561 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 CHMP6Q96FZ7 201 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 PGM2Q96G03 612 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 FAM129AQ9BZQ8 928 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 TMEM206Q9H813 350 aa20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 MRPL11Q9Y3B7 192 aaKnown RBP20.49■□□□□ 0.87
TNFRSF8-202ENST00000413146 ZNF646O15015 1829 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 PHF20L1A8MW92 1017 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 IPO5O00410 1097 aaKnown RBP20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 PODXLO00592 558 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 GGPS1O95749 300 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 PTGIRP43119 386 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 MARCKSL1P49006 195 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 TCEAL1Q15170 157 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 ERMARDQ5T6L9 678 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 PADI6Q6TGC4 694 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 MAEAQ7L5Y9 396 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 PRELID2Q8N945 189 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 ZNF622Q969S3 477 aaKnown RBP eCLIP20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 SELENOSQ9BQE4 189 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 OSBPL7Q9BZF2 842 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 LARSQ9P2J5 1176 aaKnown RBP20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 PCYOX1Q9UHG3 505 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 TLDC2A0PJX2 215 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 P4HA2O15460 535 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 CTNND1O60716 968 aaKnown RBP20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 RTN2O75298 545 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 MESDQ14696 234 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 ZNF746Q6NUN9 644 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 NLGN1Q8N2Q7 840 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 RPS6KC1Q96S38 1066 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 GRHL1Q9NZI5 618 aa20.48■□□□□ 0.87
TNFRSF8-202ENST00000413146 DDX39AO00148 427 aaKnown RBP20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 DRD4P21917 467 aa20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 COMTP21964 271 aa20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 CTNNA2P26232 953 aa20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 RPL21P46778 160 aaKnown RBP20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 GCLMP48507 274 aa20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 PPP3CAQ08209 521 aa20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 ALCAMQ13740 583 aa20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 EPC2Q52LR7 807 aa20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 ANKRD20A8PQ5CZ79 823 aa20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 RNF25Q96BH1 459 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 RANBP17Q9H2T7 1088 aaKnown RBP20.47■□□□□ 0.87
TNFRSF8-202ENST00000413146 SMIM23A6NLE4 172 aa20.46■□□□□ 0.87
TNFRSF8-202ENST00000413146 RGS16O15492 202 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF8-202ENST00000413146 CCDC137Q6PK04 289 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms