RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CES5AQ6NT32 575 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 SYCE2Q6PIF2 218 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 AGMOQ6ZNB7 445 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 BMP8AQ7Z5Y6 402 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 IFNLR1Q8IU57 520 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-210ENST00000409954 RPGRIP1Q96KN7 1286 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 FAM193BQ96PV7 902 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-210ENST00000409954 MTMR9Q96QG7 549 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 MINDY3Q9H8M7 445 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 RSAD1Q9HA92 442 aa16.17■□□□□ 0.18
MCF2L-210ENST00000409954 FAM205CA6NFA0 338 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 CLASP2O75122 1294 aaKnown RBP16.16■□□□□ 0.18
MCF2L-210ENST00000409954 LARGE1O95461 756 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 CTSAP10619 480 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 NCLP19338 710 aaKnown RBP16.16■□□□□ 0.18
MCF2L-210ENST00000409954 LLGL2Q6P1M3 1020 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 PPFIBP1Q86W92 1011 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 CCDC51Q96ER9 411 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 NECTIN4Q96NY8 510 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 LLPHQ9BRT6 129 aaKnown RBP16.16■□□□□ 0.18
MCF2L-210ENST00000409954 TMEM175Q9BSA9 504 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 ADAM7Q9H2U9 754 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 DAXXQ9UER7 740 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-210ENST00000409954 INPP5FQ9Y2H2 1132 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 FAN1Q9Y2M0 1017 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 HCFC2Q9Y5Z7 792 aa16.16■□□□□ 0.18
MCF2L-210ENST00000409954 JAK2O60674 1132 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 ITGA4P13612 1032 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 CA8P35219 290 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 ARL2P36404 184 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 ZXDAP98168 799 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 ORC2Q13416 577 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-210ENST00000409954 UBXN11Q5T124 520 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 NOTUMQ6P988 496 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 TRIM67Q6ZTA4 783 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 ZSCAN31Q96LW9 406 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-210ENST00000409954 CCDC43Q96MW1 224 aaKnown RBP16.15■□□□□ 0.18
MCF2L-210ENST00000409954 NFKBIZQ9BYH8 718 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 ZBP1Q9H171 429 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 XPNPEP1Q9NQW7 623 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 NR2E1Q9Y466 385 aa16.15■□□□□ 0.18
MCF2L-210ENST00000409954 MEIS3P2A8K0S8 358 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 INO80B-WBP1J3KQ70 363 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 NR1I2O75469 434 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 DDHD2O94830 711 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 MTHFRP42898 656 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 SLC11A1P49279 550 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 RARRES1P49788 294 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 ATAT1Q5SQI0 421 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 ZNF280BQ86YH2 543 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 HACE1Q8IYU2 909 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 RIPOR3Q96MK2 946 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 NACC1Q96RE7 527 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 GBP3Q9H0R5 595 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 CSRNP2Q9H175 543 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 TUFT1Q9NNX1 390 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 BMP2KQ9NSY1 1161 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-210ENST00000409954 DZANK1Q9NVP4 752 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 SSX2IPQ9Y2D8 614 aa16.14■□□□□ 0.17
MCF2L-210ENST00000409954 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-210ENST00000409954 INPPL1O15357 1258 aa16.13■□□□□ 0.17
MCF2L-210ENST00000409954 SEC24BO95487 1268 aa16.13■□□□□ 0.17
MCF2L-210ENST00000409954 MCM7P33993 719 aa16.13■□□□□ 0.17
MCF2L-210ENST00000409954 HFE2Q6ZVN8 426 aa16.13■□□□□ 0.17
MCF2L-210ENST00000409954 PIGOQ8TEQ8 1089 aa16.13■□□□□ 0.17
MCF2L-210ENST00000409954 C8orf76Q96K31 380 aa16.13■□□□□ 0.17
MCF2L-210ENST00000409954 EMILIN2Q9BXX0 1053 aa16.13■□□□□ 0.17
MCF2L-210ENST00000409954 FOXP1Q9H334 677 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-210ENST00000409954 DNAJB4Q9UDY4 337 aa16.13■□□□□ 0.17
MCF2L-210ENST00000409954 DBR1Q9UK59 544 aaKnown RBP16.13■□□□□ 0.17
MCF2L-210ENST00000409954 GIT1Q9Y2X7 761 aa16.13■□□□□ 0.17
MCF2L-210ENST00000409954 NRP1O14786 923 aa16.12■□□□□ 0.17
MCF2L-210ENST00000409954 TSPAN1O60635 241 aa16.12■□□□□ 0.17
MCF2L-210ENST00000409954 SPATA31C1P0DKV0 1188 aa16.12■□□□□ 0.17
MCF2L-210ENST00000409954 HOXD11P31277 338 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-210ENST00000409954 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
MCF2L-210ENST00000409954 HMGN5P82970 282 aaKnown RBP16.12■□□□□ 0.17
MCF2L-210ENST00000409954 TMEM173Q86WV6 379 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-210ENST00000409954 CATSPER3Q86XQ3 398 aa16.12■□□□□ 0.17
MCF2L-210ENST00000409954 SMG8Q8ND04 991 aaKnown RBP16.12■□□□□ 0.17
MCF2L-210ENST00000409954 MCPH1Q8NEM0 835 aa16.12■□□□□ 0.17
MCF2L-210ENST00000409954 ERMNQ8TAM6 284 aa16.12■□□□□ 0.17
MCF2L-210ENST00000409954 SLC22A17Q8WUG5 538 aa16.12■□□□□ 0.17
MCF2L-210ENST00000409954 PBXIP1Q96AQ6 731 aa16.12■□□□□ 0.17
MCF2L-210ENST00000409954 POLR3CQ9BUI4 534 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-210ENST00000409954 IPPQ9Y573 584 aa16.12■□□□□ 0.17
MCF2L-210ENST00000409954 WDR81Q562E7 1941 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 KIAA1671Q9BY89 1806 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 A0A1B0GUA9 196 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 TMEM221A6NGB7 291 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 M0R296 226 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 POMCP01189 267 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 ATP2B1P20020 1258 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 MUTP22033 750 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 GLRA2P23416 452 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 KLRC2P26717 231 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 MBTD1Q05BQ5 628 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 SIGLEC14Q08ET2 396 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
MCF2L-210ENST00000409954 FBXO18Q8NFZ0 1043 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms