RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 FAM237AA0A1B0GTK4 181 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 CCDC169A6NNP5 214 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 POLR2DO15514 142 aaKnown RBP24.67■■□□□ 1.54
PTCD3-203ENST00000409783 ZNF623O75123 536 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 PRKCBP05771 671 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 GATMP50440 423 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 EFNA5P52803 228 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 IQUBQ8NA54 791 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 DDX12PQ92771 950 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 DHX58Q96C10 678 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 FIZ1Q96SL8 496 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 CUEDC2Q9H467 287 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 KMT5AQ9NQR1 393 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 CHMP5Q9NZZ3 219 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 LRFN2Q9ULH4 789 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 USP20Q9Y2K6 914 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 CHD7Q9P2D1 2997 aa24.67■■□□□ 1.54
PTCD3-203ENST00000409783 A0A1B0GUA9 196 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 ACKR2O00590 384 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 SLC16A4O15374 487 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 LINC00271P0C7V0 271 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 IBSPP21815 317 aaPredicted RBP24.66■■□□□ 1.54
PTCD3-203ENST00000409783 NCKAP1LP55160 1127 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 MAPK6Q16659 721 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 PPP2R2DQ66LE6 453 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 NOTUMQ6P988 496 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 DYMQ7RTS9 669 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 TMEM161BQ8NDZ6 487 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 KCNN1Q92952 543 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 CCDC51Q96ER9 411 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 TMEM134Q9H6X4 195 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 LARSQ9P2J5 1176 aaKnown RBP24.66■■□□□ 1.54
PTCD3-203ENST00000409783 KCNH3Q9ULD8 1083 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 NLRC5Q86WI3 1866 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 MYO9BQ13459 2157 aa24.66■■□□□ 1.54
PTCD3-203ENST00000409783 A0A1B0GVL5 298 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 A0A1W2PQ27 194 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 A0A1W2PQ64 194 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 A0A1W2PQD8 194 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 EOMESO95936 686 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 KRT18P05783 430 aaKnown RBP24.65■■□□□ 1.54
PTCD3-203ENST00000409783 FGFR1P11362 822 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 PFKFB1P16118 471 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 RAB27AP51159 221 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 NT5DC1Q5TFE4 455 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 MRPL10Q7Z7H8 261 aaKnown RBP24.65■■□□□ 1.54
PTCD3-203ENST00000409783 DEFB123Q8N688 67 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 STAMQ92783 540 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 EIF2AQ9BY44 585 aaKnown RBP24.65■■□□□ 1.54
PTCD3-203ENST00000409783 TNMDQ9H2S6 317 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 PARVGQ9HBI0 331 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 RNF216Q9NWF9 866 aaPredicted RBP24.65■■□□□ 1.54
PTCD3-203ENST00000409783 MTMR10Q9NXD2 777 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 PCDHB2Q9Y5E7 798 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 KIAA1671Q9BY89 1806 aa24.65■■□□□ 1.54
PTCD3-203ENST00000409783 PHLPP2Q6ZVD8 1323 aa24.64■■□□□ 1.54
PTCD3-203ENST00000409783 MEIS3P2A8K0S8 358 aa24.64■■□□□ 1.54
PTCD3-203ENST00000409783 K7ERI5 159 aa24.64■■□□□ 1.54
PTCD3-203ENST00000409783 FAM13AO94988 1023 aa24.64■■□□□ 1.54
PTCD3-203ENST00000409783 CDR2LQ86X02 465 aaPredicted RBP24.64■■□□□ 1.54
PTCD3-203ENST00000409783 SMG8Q8ND04 991 aaKnown RBP24.64■■□□□ 1.54
PTCD3-203ENST00000409783 FAM161BQ96MY7 647 aa24.64■■□□□ 1.54
PTCD3-203ENST00000409783 KCNG1Q9UIX4 513 aa24.64■■□□□ 1.54
PTCD3-203ENST00000409783 RALGAPA2Q2PPJ7 1873 aa24.64■■□□□ 1.53
PTCD3-203ENST00000409783 MAPTP10636 758 aaKnown RBP24.63■■□□□ 1.53
PTCD3-203ENST00000409783 SKIP12755 728 aa24.63■■□□□ 1.53
PTCD3-203ENST00000409783 SMTNP53814 917 aa24.63■■□□□ 1.53
PTCD3-203ENST00000409783 NCBP1Q09161 790 aaKnown RBP24.63■■□□□ 1.53
PTCD3-203ENST00000409783 PRPF4BQ13523 1007 aaKnown RBP24.63■■□□□ 1.53
PTCD3-203ENST00000409783 GRIN2CQ14957 1233 aa24.63■■□□□ 1.53
PTCD3-203ENST00000409783 CLLU1OSQ5K130 101 aa24.63■■□□□ 1.53
PTCD3-203ENST00000409783 CMTR2Q8IYT2 770 aaKnown RBP24.63■■□□□ 1.53
PTCD3-203ENST00000409783 MYCT1Q8N699 235 aa24.63■■□□□ 1.53
PTCD3-203ENST00000409783 PDZD7Q9H5P4 517 aa24.63■■□□□ 1.53
PTCD3-203ENST00000409783 CDH23Q9H251 3354 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 FRMD3A2A2Y4 597 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 ACTN4O43707 911 aaKnown RBP24.62■■□□□ 1.53
PTCD3-203ENST00000409783 TBCAO75347 108 aaKnown RBP24.62■■□□□ 1.53
PTCD3-203ENST00000409783 LIG1P18858 919 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 ERVK-21P61565 698 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 EEF1DP3Q658K8 133 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 CNNM4Q6P4Q7 775 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 SLC27A1Q6PCB7 646 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 HAUS6Q7Z4H7 955 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 LPPQ93052 612 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 GUCD1Q96NT3 240 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 CASD1Q96PB1 797 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 TRIM9Q9C026 710 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 GOLPH3LQ9H4A5 285 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 MAGEF1Q9HAY2 307 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 SERTAD1Q9UHV2 236 aa24.62■■□□□ 1.53
PTCD3-203ENST00000409783 TRAK2O60296 914 aa24.61■■□□□ 1.53
PTCD3-203ENST00000409783 NDUFA8P51970 172 aa24.61■■□□□ 1.53
PTCD3-203ENST00000409783 BTG3Q14201 252 aaPredicted RBP24.61■■□□□ 1.53
PTCD3-203ENST00000409783 AGMOQ6ZNB7 445 aa24.61■■□□□ 1.53
PTCD3-203ENST00000409783 SFR1Q86XK3 245 aa24.61■■□□□ 1.53
PTCD3-203ENST00000409783 FIBCD1Q8N539 461 aa24.61■■□□□ 1.53
PTCD3-203ENST00000409783 RNF169Q8NCN4 708 aa24.61■■□□□ 1.53
PTCD3-203ENST00000409783 CLP1Q92989 425 aaKnown RBP24.61■■□□□ 1.53
PTCD3-203ENST00000409783 TGS1Q96RS0 853 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms