RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 LRRC8DQ7L1W4 858 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 PPP1R16BQ96T49 567 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 TMEM206Q9H813 350 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 CITO14578 2027 aa22.5■■□□□ 1.19
VSX1-203ENST00000409285 INO80B-WBP1J3KQ70 363 aa22.49■■□□□ 1.19
VSX1-203ENST00000409285 ACKR2O00590 384 aa22.49■■□□□ 1.19
VSX1-203ENST00000409285 SFPQP23246 707 aaKnown RBP eCLIP22.49■■□□□ 1.19
VSX1-203ENST00000409285 AMHR2Q16671 573 aa22.49■■□□□ 1.19
VSX1-203ENST00000409285 KNOP1Q1ED39 458 aaKnown RBP22.49■■□□□ 1.19
VSX1-203ENST00000409285 FBXO47Q5MNV8 452 aa22.49■■□□□ 1.19
VSX1-203ENST00000409285 DHTKD1Q96HY7 919 aaPredicted RBP22.49■■□□□ 1.19
VSX1-203ENST00000409285 ZNF668Q96K58 619 aaPredicted RBP22.49■■□□□ 1.19
VSX1-203ENST00000409285 ACCSQ96QU6 501 aa22.49■■□□□ 1.19
VSX1-203ENST00000409285 EXOC7Q9UPT5 735 aa22.49■■□□□ 1.19
VSX1-203ENST00000409285 GINS2Q9Y248 185 aa22.49■■□□□ 1.19
VSX1-203ENST00000409285 CNTNAP2Q9UHC6 1331 aa22.49■■□□□ 1.19
VSX1-203ENST00000409285 ANK1P16157 1881 aa22.48■■□□□ 1.19
VSX1-203ENST00000409285 RALGAPA2Q2PPJ7 1873 aa22.48■■□□□ 1.19
VSX1-203ENST00000409285 PSMA7O14818 248 aa22.48■■□□□ 1.19
VSX1-203ENST00000409285 PRPF6O94906 941 aaKnown RBP22.48■■□□□ 1.19
VSX1-203ENST00000409285 PRKCBP05771 671 aa22.48■■□□□ 1.19
VSX1-203ENST00000409285 CD44P16070 742 aaKnown RBP22.48■■□□□ 1.19
VSX1-203ENST00000409285 KCNA1Q09470 495 aa22.48■■□□□ 1.19
VSX1-203ENST00000409285 ZPBP2Q6X784 338 aa22.48■■□□□ 1.19
VSX1-203ENST00000409285 TMEM174Q8WUU8 243 aa22.48■■□□□ 1.19
VSX1-203ENST00000409285 GZF1Q9H116 711 aaPredicted RBP22.48■■□□□ 1.19
VSX1-203ENST00000409285 KCTD10Q9H3F6 313 aa22.48■■□□□ 1.19
VSX1-203ENST00000409285 TMEM39AQ9NV64 488 aa22.48■■□□□ 1.19
VSX1-203ENST00000409285 CAVIN2O95810 425 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 SNRPFP62306 86 aaKnown RBP22.47■■□□□ 1.19
VSX1-203ENST00000409285 MBTPS1Q14703 1052 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 CENPPQ6IPU0 288 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 LRSAM1Q6UWE0 723 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 TSHZ1Q6ZSZ6 1077 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 MRPL4Q9BYD3 311 aaKnown RBP22.47■■□□□ 1.19
VSX1-203ENST00000409285 CGNQ9P2M7 1197 aaKnown RBP22.47■■□□□ 1.19
VSX1-203ENST00000409285 EDN1P05305 212 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 ERCC5P28715 1186 aaPredicted RBP22.47■■□□□ 1.19
VSX1-203ENST00000409285 LPIN1Q14693 890 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 ZCWPW2Q504Y3 356 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 FAM228AQ86W67 206 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 GBP3Q9H0R5 595 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 WNT8AQ9H1J5 351 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 TYW1Q9NV66 732 aaKnown RBP22.47■■□□□ 1.19
VSX1-203ENST00000409285 MAPK8IP1Q9UQF2 711 aa22.47■■□□□ 1.19
VSX1-203ENST00000409285 NOC2LQ9Y3T9 749 aaKnown RBP22.47■■□□□ 1.19
VSX1-203ENST00000409285 PDCD11Q14690 1871 aaKnown RBP22.46■■□□□ 1.19
VSX1-203ENST00000409285 PDXKO00764 312 aa22.46■■□□□ 1.19
VSX1-203ENST00000409285 TSPAN1O60635 241 aa22.46■■□□□ 1.19
VSX1-203ENST00000409285 RPS6KA5O75582 802 aa22.46■■□□□ 1.19
VSX1-203ENST00000409285 ERLIN2O94905 339 aa22.46■■□□□ 1.19
VSX1-203ENST00000409285 AXLP30530 894 aa22.46■■□□□ 1.19
VSX1-203ENST00000409285 LRRC63Q05C16 580 aa22.46■■□□□ 1.19
VSX1-203ENST00000409285 PRPF4BQ13523 1007 aaKnown RBP22.46■■□□□ 1.19
VSX1-203ENST00000409285 GOLGA5Q8TBA6 731 aa22.46■■□□□ 1.19
VSX1-203ENST00000409285 AGPAT5Q9NUQ2 364 aa22.46■■□□□ 1.19
VSX1-203ENST00000409285 TRAF3IP3Q9Y228 551 aa22.46■■□□□ 1.19
VSX1-203ENST00000409285 CEP290O15078 2479 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 UMODL1Q5DID0 1318 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 TRIP11Q15643 1979 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 HNRNPDLO14979 420 aaKnown RBP22.45■■□□□ 1.18
VSX1-203ENST00000409285 TGFB1I1O43294 461 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 CSDE1O75534 798 aaKnown RBP22.45■■□□□ 1.18
VSX1-203ENST00000409285 TIMP1P01033 207 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 CCNE1P24864 410 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 RFC2P35250 354 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 PAK1Q13153 545 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 NFIL3Q16649 462 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 CATSPER4Q7RTX7 472 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 DPF3Q92784 378 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 BPIFA3Q9BQP9 254 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 NAT10Q9H0A0 1025 aaKnown RBP22.45■■□□□ 1.18
VSX1-203ENST00000409285 RWDD2AQ9UIY3 292 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 STYXL1Q9Y6J8 313 aa22.45■■□□□ 1.18
VSX1-203ENST00000409285 BICDL2A1A5D9 508 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 GPR182O15218 404 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 TOM1L1O75674 476 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 ARF4P18085 180 aaPredicted RBP22.44■■□□□ 1.18
VSX1-203ENST00000409285 PROZP22891 400 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 EDRF1Q3B7T1 1238 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 ANO6Q4KMQ2 910 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 C11orf57Q6ZUT1 292 aaPredicted RBP22.44■■□□□ 1.18
VSX1-203ENST00000409285 HS2ST1Q7LGA3 356 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 NELFCDQ8IXH7 590 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 C12orf56Q8IXR9 622 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 SYCP3Q8IZU3 236 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 P2RX5Q93086 422 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 CCDC51Q96ER9 411 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 ACO2Q99798 780 aaKnown RBP22.44■■□□□ 1.18
VSX1-203ENST00000409285 SEMA6BQ9H3T3 888 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 AGO3Q9H9G7 860 aaKnown RBP22.44■■□□□ 1.18
VSX1-203ENST00000409285 ERVK-5Q9HDB9 667 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 TNFSF13BQ9Y275 285 aa22.44■■□□□ 1.18
VSX1-203ENST00000409285 A0A1B0GUA9 196 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 TRIM43BA6NCK2 446 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 CXCL10P02778 98 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 GHRP10912 638 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 NCBP1Q09161 790 aaKnown RBP22.43■■□□□ 1.18
VSX1-203ENST00000409285 GPNMBQ14956 572 aa22.43■■□□□ 1.18
VSX1-203ENST00000409285 SLC39A4Q6P5W5 647 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms