RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 RASGRF2O14827 1237 aa13.95□□□□□ -0.18
PTPRN-202ENST00000409251 TARSP26639 723 aaKnown RBP13.95□□□□□ -0.18
PTPRN-202ENST00000409251 CUL1Q13616 776 aa13.95□□□□□ -0.18
PTPRN-202ENST00000409251 BYSLQ13895 437 aaKnown RBP13.95□□□□□ -0.18
PTPRN-202ENST00000409251 SLC18A3Q16572 532 aa13.95□□□□□ -0.18
PTPRN-202ENST00000409251 SLC30A9Q6PML9 568 aa13.95□□□□□ -0.18
PTPRN-202ENST00000409251 MYOZ2Q9NPC6 264 aa13.95□□□□□ -0.18
PTPRN-202ENST00000409251 ANKRD31Q8N7Z5 1873 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 IRF6O14896 467 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 H2AFZP0C0S5 128 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 XRCC4Q13426 336 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 NBPF20Q3BBV1 942 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 MEI1Q5TIA1 1274 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 ZNF746Q6NUN9 644 aaPredicted RBP13.94□□□□□ -0.18
PTPRN-202ENST00000409251 H2AFVQ71UI9 128 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 SRRM1Q8IYB3 904 aaKnown RBP13.94□□□□□ -0.18
PTPRN-202ENST00000409251 AMNQ9BXJ7 453 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 FGFBP2Q9BYJ0 223 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 AMFRQ9UKV5 643 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 MYH1P12882 1939 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 TIAM2Q8IVF5 1701 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 SUN1O94901 812 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 STAT2P52630 851 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 NSMFQ6X4W1 530 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 BAP1Q92560 729 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 C18orf8Q96DM3 657 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.94□□□□□ -0.18
PTPRN-202ENST00000409251 KBTBD4Q9NVX7 518 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 ASIC3Q9UHC3 531 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 CNOT7Q9UIV1 285 aaKnown RBP13.94□□□□□ -0.18
PTPRN-202ENST00000409251 ZMYND8Q9ULU4 1186 aaPredicted RBP13.94□□□□□ -0.18
PTPRN-202ENST00000409251 MGRN1O60291 552 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 NR2F2P24468 414 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 KCNMA1Q12791 1236 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 FAM26FQ5R3K3 315 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 MMTAG2Q9BU76 263 aaKnown RBP13.94□□□□□ -0.18
PTPRN-202ENST00000409251 IDI2Q9BXS1 227 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 FAM129AQ9BZQ8 928 aa13.94□□□□□ -0.18
PTPRN-202ENST00000409251 IGKV6D-41A0A0C4DH26 115 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 CCDC169A6NNP5 214 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 EDIL3O43854 480 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 GH1P01241 217 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 PSMC6P62333 389 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 SPP2Q13103 211 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 CYP4F22Q6NT55 531 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 IFT74Q96LB3 600 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 IKZF4Q9H2S9 585 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 RAVER2Q9HCJ3 691 aaKnown RBP13.93□□□□□ -0.18
PTPRN-202ENST00000409251 NFKBIEO00221 500 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 SPAG7O75391 227 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 PRLRP16471 622 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 KCNH2Q12809 1159 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 USP4Q13107 963 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 CTTNQ14247 550 aaKnown RBP13.93□□□□□ -0.18
PTPRN-202ENST00000409251 LMNTD2Q8IXW0 634 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 RNF10Q8N5U6 811 aaKnown RBP13.93□□□□□ -0.18
PTPRN-202ENST00000409251 CTTNBP2NLQ9P2B4 639 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 KLHL14Q9P2G3 628 aa13.93□□□□□ -0.18
PTPRN-202ENST00000409251 ANKRD62A6NC57 917 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 SPDYE5A6NIY4 337 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 ARHGAP4P98171 946 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 FKBP3Q00688 224 aaKnown RBP13.92□□□□□ -0.18
PTPRN-202ENST00000409251 MESDQ14696 234 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 ARL6IP4Q66PJ3 421 aaKnown RBP13.92□□□□□ -0.18
PTPRN-202ENST00000409251 TMEM154Q6P9G4 183 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 ZNF571Q7Z3V5 609 aaPredicted RBP13.92□□□□□ -0.18
PTPRN-202ENST00000409251 TRIM4Q9C037 500 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 HAO1Q9UJM8 370 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 FLOT1O75955 427 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 MYCLP12524 364 aaPredicted RBP13.92□□□□□ -0.18
PTPRN-202ENST00000409251 ZC3H18Q86VM9 953 aaKnown RBP13.92□□□□□ -0.18
PTPRN-202ENST00000409251 TPH2Q8IWU9 490 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 NUDCD1Q96RS6 583 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 PAPOLBQ9NRJ5 636 aaKnown RBP13.92□□□□□ -0.18
PTPRN-202ENST00000409251 TMEM120BA0PK00 339 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 DPPA5A6NC42 116 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 FAM86B1E9PN63 330 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 FAM86B2P0C5J1 330 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 HGSNATQ68CP4 663 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 TEKT4Q8WW24 435 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 HAS1Q92839 578 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 PWWP2AQ96N64 755 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 POP1Q99575 1024 aaKnown RBP13.92□□□□□ -0.18
PTPRN-202ENST00000409251 RIC8AQ9NPQ8 531 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 RNF14Q9UBS8 474 aa13.92□□□□□ -0.18
PTPRN-202ENST00000409251 PIAS1O75925 651 aa13.91□□□□□ -0.18
PTPRN-202ENST00000409251 SNUPNO95149 360 aaKnown RBP13.91□□□□□ -0.18
PTPRN-202ENST00000409251 GRB10Q13322 594 aa13.91□□□□□ -0.18
PTPRN-202ENST00000409251 IFI16Q16666 785 aaKnown RBP13.91□□□□□ -0.18
PTPRN-202ENST00000409251 ANGEL2Q5VTE6 544 aaKnown RBP13.91□□□□□ -0.18
PTPRN-202ENST00000409251 C3orf20Q8ND61 904 aa13.91□□□□□ -0.18
PTPRN-202ENST00000409251 ERP27Q96DN0 273 aa13.91□□□□□ -0.18
PTPRN-202ENST00000409251 MTRF1LQ9UGC7 380 aaKnown RBP13.91□□□□□ -0.18
PTPRN-202ENST00000409251 HACL1Q9UJ83 578 aa13.91□□□□□ -0.18
PTPRN-202ENST00000409251 A0A1B0GVG6 124 aa13.91□□□□□ -0.18
PTPRN-202ENST00000409251 VIL1P09327 827 aaKnown RBP13.91□□□□□ -0.18
PTPRN-202ENST00000409251 RFC5P40937 340 aa13.91□□□□□ -0.18
PTPRN-202ENST00000409251 MTMR2Q13614 643 aa13.91□□□□□ -0.18
PTPRN-202ENST00000409251 EXOC3L4Q17RC7 722 aa13.91□□□□□ -0.18
PTPRN-202ENST00000409251 ERMARDQ5T6L9 678 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms