RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 TMEM143Q96AN5 459 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 PCYT2Q99447 389 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 DHX33Q9H6R0 707 aaKnown RBP26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 ARHGAP28Q9P2N2 729 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 SCN4AP35499 1836 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 TULP1O00294 542 aaPredicted RBP26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 HNRNPDLO14979 420 aaKnown RBP26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 ZSCAN20P17040 1043 aaPredicted RBP26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 EPC2Q52LR7 807 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 PHLDB3Q6NSJ2 640 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 SLC39A4Q6P5W5 647 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 ALKBH5Q6P6C2 394 aaKnown RBP26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 SLC7A3Q8WY07 619 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 CAPZA3Q96KX2 299 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 PARD6BQ9BYG5 372 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 NAGPAQ9UK23 515 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 SNX12Q9UMY4 172 aa26.79■■□□□ 1.88
DNMT3A-206ENST00000406659 DNAJC25-GNG10A0A024R161 153 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 SOCS7O14512 581 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 PMM2O15305 246 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 RFC5P40937 340 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 MXI1P50539 228 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 MCCD1P59942 119 aaPredicted RBP26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 ARHGAP44Q17R89 818 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 VTI1AQ96AJ9 217 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 FGD4Q96M96 766 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 PACSIN1Q9BY11 444 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 PORCNQ9H237 461 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 PNMA3Q9UL41 463 aa26.78■■□□□ 1.88
DNMT3A-206ENST00000406659 GARTP22102 1010 aa26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 SCP2P22307 547 aa26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 KLRC1P26715 233 aa26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 TCF7P36402 384 aaPredicted RBP26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 ERVK-9P63128 1117 aa26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 BMS1Q14692 1282 aaKnown RBP26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 CAGE1Q8TC20 777 aa26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 AFAP1L1Q8TED9 768 aa26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 AZI2Q9H6S1 392 aa26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 ZNF408Q9H9D4 720 aa26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 UBE2TQ9NPD8 197 aaPredicted RBP26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 DDX41Q9UJV9 622 aaKnown RBP26.77■■□□□ 1.88
DNMT3A-206ENST00000406659 BTNL10A8MVZ5 291 aa26.76■■□□□ 1.88
DNMT3A-206ENST00000406659 PRLRP16471 622 aa26.76■■□□□ 1.88
DNMT3A-206ENST00000406659 STRN3Q13033 797 aa26.76■■□□□ 1.88
DNMT3A-206ENST00000406659 TAS1R3Q7RTX0 852 aa26.76■■□□□ 1.88
DNMT3A-206ENST00000406659 USP37Q86T82 979 aa26.76■■□□□ 1.88
DNMT3A-206ENST00000406659 TMC2Q8TDI7 906 aa26.76■■□□□ 1.88
DNMT3A-206ENST00000406659 CCDC127Q96BQ5 260 aa26.76■■□□□ 1.88
DNMT3A-206ENST00000406659 FBXL18Q96ME1 805 aa26.76■■□□□ 1.88
DNMT3A-206ENST00000406659 TMEM117Q9H0C3 514 aa26.76■■□□□ 1.88
DNMT3A-206ENST00000406659 ARL2P36404 184 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 TMCO3Q6UWJ1 677 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 GPD1LQ8N335 351 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 SHCBP1Q8NEM2 672 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 DEPTORQ8TB45 409 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 ASAP3Q8TDY4 903 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 PARD3BQ8TEW8 1205 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 GTF3C2Q8WUA4 911 aaPredicted RBP26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 RPGRIP1Q96KN7 1286 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 MFSD14AQ96MC6 490 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 MMS19Q96T76 1030 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 GPR88Q9GZN0 384 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 HYOU1Q9Y4L1 999 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 MYH10P35580 1976 aa26.76■■□□□ 1.87
DNMT3A-206ENST00000406659 NAMPTP43490 491 aa26.75■■□□□ 1.87
DNMT3A-206ENST00000406659 LIG4P49917 911 aa26.75■■□□□ 1.87
DNMT3A-206ENST00000406659 U2AF1L4Q8WU68 220 aaKnown RBP26.75■■□□□ 1.87
DNMT3A-206ENST00000406659 FAM167AQ96KS9 214 aa26.75■■□□□ 1.87
DNMT3A-206ENST00000406659 CEP89Q96ST8 783 aa26.75■■□□□ 1.87
DNMT3A-206ENST00000406659 LRRC37A2A6NM11 1700 aa26.75■■□□□ 1.87
DNMT3A-206ENST00000406659 LRRIQ4A6NIV6 560 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 UNCXA6NJT0 531 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 DDX3XO00571 662 aaKnown RBP eCLIP26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 ZNF185O15231 689 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 ARIH2O95376 493 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 TCP1P17987 556 aaKnown RBP26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 GLRA2P23416 452 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 MAP2K1Q02750 393 aaPredicted RBP26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 TARBP2Q15633 366 aaKnown RBP26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 CELF3Q5SZQ8 465 aaKnown RBP26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 TSKSQ9UJT2 592 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 NENFQ9UMX5 172 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 USP20Q9Y2K6 914 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 ATP8B3O60423 1300 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 NOP56O00567 594 aaKnown RBP26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 GRIN3BO60391 1043 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 PALMO75781 387 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 CYP2C8P10632 490 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 CYP24A1Q07973 514 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 ARHGEF19Q8IW93 802 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 ANKZF1Q9H8Y5 726 aa26.74■■□□□ 1.87
DNMT3A-206ENST00000406659 LRRIQ3A6PVS8 624 aaPredicted RBP26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 FOXN3O00409 490 aaPredicted RBP26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 H2AFZP0C0S5 128 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 GTF2H1P32780 548 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 IFI16Q16666 785 aaKnown RBP26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 KRT39Q6A163 491 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 H2AFVQ71UI9 128 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 MSANTD4Q8NCY6 345 aa26.73■■□□□ 1.87
DNMT3A-206ENST00000406659 GLG1Q92896 1179 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms