RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 LRRC55Q6ZSA7 311 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 ZNF598Q86UK7 904 aaKnown RBP11.46□□□□□ -0.57
FAM49A-202ENST00000406434 THNSL1Q8IYQ7 743 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 SPPL3Q8TCT6 385 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 AGPAT5Q9NUQ2 364 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 FAM105AQ9NUU6 356 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 INPP5FQ9Y2H2 1132 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 PCDHB2Q9Y5E7 798 aa11.46□□□□□ -0.57
FAM49A-202ENST00000406434 RALGAPA2Q2PPJ7 1873 aa11.46□□□□□ -0.58
FAM49A-202ENST00000406434 EYA4O95677 639 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 ITGB1P05556 798 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 ATF7P17544 494 aaPredicted RBP11.45□□□□□ -0.58
FAM49A-202ENST00000406434 HOXA11P31270 313 aaPredicted RBP11.45□□□□□ -0.58
FAM49A-202ENST00000406434 MRPS5P82675 430 aaKnown RBP11.45□□□□□ -0.58
FAM49A-202ENST00000406434 CEBPZQ03701 1054 aaKnown RBP11.45□□□□□ -0.58
FAM49A-202ENST00000406434 POU5F1BQ06416 359 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 SF3A1Q15459 793 aaKnown RBP11.45□□□□□ -0.58
FAM49A-202ENST00000406434 TMEM132AQ24JP5 1023 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 NAALADL2Q58DX5 795 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 TCEAL5Q5H9L2 206 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 ARL6IP4Q66PJ3 421 aaKnown RBP11.45□□□□□ -0.58
FAM49A-202ENST00000406434 SMYD5Q6GMV2 418 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 FAM173BQ6P4H8 233 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 ZBTB8OSQ8IWT0 167 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 COLGALT1Q8NBJ5 622 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 MICAL1Q8TDZ2 1067 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 POF1BQ8WVV4 589 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 P2RX5Q93086 422 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 HLA-CQ95604 372 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 SNX21Q969T3 373 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 PGBD4Q96DM1 585 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 CDK5RAP3Q96JB5 506 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 IFT74Q96LB3 600 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 MMTAG2Q9BU76 263 aaKnown RBP11.45□□□□□ -0.58
FAM49A-202ENST00000406434 IGFLR1Q9H665 355 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 CWH43Q9H720 699 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 A0A0C4DFX4 3053 aa11.45□□□□□ -0.58
FAM49A-202ENST00000406434 MEIS3P2A8K0S8 358 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 TSPAN1O60635 241 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 ZNF623O75123 536 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 LAG3P18627 525 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 AXLP30530 894 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 PBX3P40426 434 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 UBA7P41226 1012 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 RNASELQ05823 741 aaKnown RBP11.44□□□□□ -0.58
FAM49A-202ENST00000406434 MBTD1Q05BQ5 628 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 TIGD5Q53EQ6 642 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 UBXN11Q5T124 520 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 FOXD4L5Q5VV16 416 aaPredicted RBP11.44□□□□□ -0.58
FAM49A-202ENST00000406434 NOTUMQ6P988 496 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 GLB1LQ6UWU2 654 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 CABP7Q86V35 215 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 CDR2LQ86X02 465 aaPredicted RBP11.44□□□□□ -0.58
FAM49A-202ENST00000406434 DEPTORQ8TB45 409 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 ATXN2LQ8WWM7 1075 aaKnown RBP11.44□□□□□ -0.58
FAM49A-202ENST00000406434 FOXD4L4Q8WXT5 416 aaPredicted RBP11.44□□□□□ -0.58
FAM49A-202ENST00000406434 ASB2Q96Q27 587 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 LMAN2LQ9H0V9 348 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 NSUN3Q9H649 340 aaKnown RBP11.44□□□□□ -0.58
FAM49A-202ENST00000406434 COG5Q9UP83 839 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 CLIC4Q9Y696 253 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 COL4A6Q14031 1691 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 KIAA1671Q9BY89 1806 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 REV3LO60673 3130 aa11.44□□□□□ -0.58
FAM49A-202ENST00000406434 TCF20Q9UGU0 1960 aaKnown RBP11.43□□□□□ -0.58
FAM49A-202ENST00000406434 CCDC169A6NNP5 214 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 NT5C1B-RDH14C9J2C7 533 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 B4GALT5O43286 388 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 STX6O43752 255 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 OFD1O75665 1012 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 FGF18O76093 207 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 BMP15O95972 392 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 ITGA4P13612 1032 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 ARF4P18085 180 aaPredicted RBP11.43□□□□□ -0.58
FAM49A-202ENST00000406434 DNAJB1P25685 340 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 MARCKSP29966 332 aaPredicted RBP11.43□□□□□ -0.58
FAM49A-202ENST00000406434 RAB27AP51159 221 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 RAD51AP2Q09MP3 1159 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 RESTQ13127 1097 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 DHX8Q14562 1220 aaKnown RBP11.43□□□□□ -0.58
FAM49A-202ENST00000406434 PPP2R5AQ15172 486 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 PCBP1Q15365 356 aaKnown RBP eCLIP11.43□□□□□ -0.58
FAM49A-202ENST00000406434 AAK1Q2M2I8 961 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 NOMO2Q5JPE7 1267 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 TJAP1Q5JTD0 557 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 RINT1Q6NUQ1 792 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 KCNT2Q6UVM3 1135 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 KCNK18Q7Z418 384 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 LRRC43Q8N309 656 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 RASSF8Q8NHQ8 419 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 BSNDQ8WZ55 320 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 ZNF558Q96NG5 402 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 PNMA5Q96PV4 448 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 TRAIPQ9BWF2 469 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 APOL6Q9BWW8 343 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 EIF2AQ9BY44 585 aaKnown RBP11.43□□□□□ -0.58
FAM49A-202ENST00000406434 TRIM6Q9C030 488 aaPredicted RBP11.43□□□□□ -0.58
FAM49A-202ENST00000406434 GBP3Q9H0R5 595 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 CSRNP2Q9H175 543 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 MTMR6Q9Y217 621 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms