RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TMC7Q7Z402 723 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 MRPL10Q7Z7H8 261 aaKnown RBP14.77□□□□□ -0.05
SDF4-203ENST00000403997 IFNLR1Q8IU57 520 aaPredicted RBP14.77□□□□□ -0.05
SDF4-203ENST00000403997 SLC39A11Q8N1S5 342 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 MCPH1Q8NEM0 835 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 URGCPQ8TCY9 931 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 CPB2Q96IY4 423 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 TCF25Q9BQ70 676 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 RAB34Q9BZG1 259 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 GBP3Q9H0R5 595 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 NRDE2Q9H7Z3 1164 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 ENTPD7Q9NQZ7 604 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 TBC1D13Q9NVG8 400 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 LRWD1Q9UFC0 647 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 CD207Q9UJ71 328 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 SMC3Q9UQE7 1217 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 MUC3AQ02505 3323 aa14.77□□□□□ -0.05
SDF4-203ENST00000403997 ATG2AQ2TAZ0 1938 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 PLXNA4Q9HCM2 1894 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 LRRIQ4A6NIV6 560 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 ITGA4P13612 1032 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 CYP11B2P19099 503 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 NCLP19338 710 aaKnown RBP14.76□□□□□ -0.05
SDF4-203ENST00000403997 MUTP22033 750 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 SSTR3P32745 418 aaPredicted RBP14.76□□□□□ -0.05
SDF4-203ENST00000403997 MBTD1Q05BQ5 628 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 ECM1Q16610 540 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 NOTUMQ6P988 496 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 AGMOQ6ZNB7 445 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 GJD3Q8N144 294 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 CNNM3Q8NE01 707 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 TMEM169Q96HH4 297 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 CDCA3Q99618 268 aaPredicted RBP14.76□□□□□ -0.05
SDF4-203ENST00000403997 NFKBIZQ9BYH8 718 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 RSAD1Q9HA92 442 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 NGRNQ9NPE2 291 aaKnown RBP14.76□□□□□ -0.05
SDF4-203ENST00000403997 CD320Q9NPF0 282 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 KIAA1024Q9UPX6 916 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.76□□□□□ -0.05
SDF4-203ENST00000403997 STK24Q9Y6E0 443 aa14.76□□□□□ -0.05
SDF4-203ENST00000403997 CNTNAP2Q9UHC6 1331 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 CARNS1A5YM72 827 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 LAD1O00515 517 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 MBTPS2O43462 519 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 ARF4P18085 180 aaPredicted RBP14.75□□□□□ -0.05
SDF4-203ENST00000403997 BMS1Q14692 1282 aaKnown RBP14.75□□□□□ -0.05
SDF4-203ENST00000403997 DUSP6Q16828 381 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 RILPL1Q5EBL4 403 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 DTHD1Q6ZMT9 781 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 SMG8Q8ND04 991 aaKnown RBP14.75□□□□□ -0.05
SDF4-203ENST00000403997 SNX29Q8TEQ0 813 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 CCDC51Q96ER9 411 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 FAM193BQ96PV7 902 aaPredicted RBP14.75□□□□□ -0.05
SDF4-203ENST00000403997 EIF2AQ9BY44 585 aaKnown RBP14.75□□□□□ -0.05
SDF4-203ENST00000403997 TRIM6Q9C030 488 aaPredicted RBP14.75□□□□□ -0.05
SDF4-203ENST00000403997 CSRNP2Q9H175 543 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 UBN1Q9NPG3 1134 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.75□□□□□ -0.05
SDF4-203ENST00000403997 CLEC1BQ9P126 229 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 KANSL3Q9P2N6 904 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 BARX2Q9UMQ3 279 aaPredicted RBP14.75□□□□□ -0.05
SDF4-203ENST00000403997 ARID2Q68CP9 1835 aa14.75□□□□□ -0.05
SDF4-203ENST00000403997 FSD2A1L4K1 749 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 HIDE1A8MVS5 230 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 B4GALT5O43286 388 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 CXCL14O95715 111 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 GLP2RO95838 553 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 ALDH2P05091 517 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 GALTP07902 379 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 CA8P35219 290 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 AFF1P51825 1210 aaKnown RBP14.74□□□□□ -0.05
SDF4-203ENST00000403997 SMAD4Q13485 552 aaKnown RBP14.74□□□□□ -0.05
SDF4-203ENST00000403997 AMHR2Q16671 573 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 LARP1BQ659C4 914 aaKnown RBP14.74□□□□□ -0.05
SDF4-203ENST00000403997 ZNF280BQ86YH2 543 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 ZBTB8OSQ8IWT0 167 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 VPS52Q8N1B4 723 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 IGSF22Q8N9C0 903 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 MSLNLQ96KJ4 702 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 APOL6Q9BWW8 343 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 BHMT2Q9H2M3 363 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 DDX19AQ9NUU7 478 aaKnown RBP14.74□□□□□ -0.05
SDF4-203ENST00000403997 DNAJB4Q9UDY4 337 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 HES2Q9Y543 173 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 IPPQ9Y573 584 aa14.74□□□□□ -0.05
SDF4-203ENST00000403997 DDHD2O94830 711 aa14.73□□□□□ -0.05
SDF4-203ENST00000403997 POMCP01189 267 aa14.73□□□□□ -0.05
SDF4-203ENST00000403997 LIG1P18858 919 aa14.73□□□□□ -0.05
SDF4-203ENST00000403997 CDC25AP30304 524 aa14.73□□□□□ -0.05
SDF4-203ENST00000403997 PRPHP41219 470 aa14.73□□□□□ -0.05
SDF4-203ENST00000403997 SLC11A1P49279 550 aa14.73□□□□□ -0.05
SDF4-203ENST00000403997 RBM10P98175 930 aaKnown RBP14.73□□□□□ -0.05
SDF4-203ENST00000403997 SMC1AQ14683 1233 aaKnown RBP14.73□□□□□ -0.05
SDF4-203ENST00000403997 SMAD2Q15796 467 aaKnown RBP14.73□□□□□ -0.05
SDF4-203ENST00000403997 IL17AQ16552 155 aa14.73□□□□□ -0.05
SDF4-203ENST00000403997 KRT79Q5XKE5 535 aa14.73□□□□□ -0.05
SDF4-203ENST00000403997 TMEM173Q86WV6 379 aaPredicted RBP14.73□□□□□ -0.05
SDF4-203ENST00000403997 CDR2LQ86X02 465 aaPredicted RBP14.73□□□□□ -0.05
SDF4-203ENST00000403997 ADHFE1Q8IWW8 467 aa14.73□□□□□ -0.05
SDF4-203ENST00000403997 HACE1Q8IYU2 909 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms