RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 CASC4Q6P4E1 433 aa19.92■□□□□ 0.78
GAREM2-201ENST00000401533 NSUN6Q8TEA1 469 aaKnown RBP19.92■□□□□ 0.78
GAREM2-201ENST00000401533 PCDHA10Q9Y5I2 948 aa19.92■□□□□ 0.78
GAREM2-201ENST00000401533 ZRANB2O95218 330 aaKnown RBP eCLIP19.92■□□□□ 0.78
GAREM2-201ENST00000401533 PBX1P40424 430 aa19.92■□□□□ 0.78
GAREM2-201ENST00000401533 SETDB1Q15047 1291 aa19.92■□□□□ 0.78
GAREM2-201ENST00000401533 HNRNPLLQ8WVV9 542 aaKnown RBP19.92■□□□□ 0.78
GAREM2-201ENST00000401533 CPA5Q8WXQ8 436 aa19.92■□□□□ 0.78
GAREM2-201ENST00000401533 MXRA8Q9BRK3 442 aa19.92■□□□□ 0.78
GAREM2-201ENST00000401533 CALN1Q9BXU9 219 aa19.92■□□□□ 0.78
GAREM2-201ENST00000401533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.91■□□□□ 0.78
GAREM2-201ENST00000401533 ATP5DP30049 168 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 BPIFB4P59827 614 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 CCDC6Q16204 474 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 TLR10Q9BXR5 811 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 KRT76Q01546 638 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 LRRC14Q15048 493 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 FIGNQ5HY92 759 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 CDR2LQ86X02 465 aaPredicted RBP19.91■□□□□ 0.78
GAREM2-201ENST00000401533 ZKSCAN4Q969J2 545 aaPredicted RBP19.91■□□□□ 0.78
GAREM2-201ENST00000401533 TACO1Q9BSH4 297 aaKnown RBP19.91■□□□□ 0.78
GAREM2-201ENST00000401533 POLR3FQ9H1D9 316 aaPredicted RBP19.91■□□□□ 0.78
GAREM2-201ENST00000401533 MYO3BQ8WXR4 1341 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 KRT1P04264 644 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 MICALL2Q8IY33 904 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 GLIS2Q9BZE0 524 aaPredicted RBP19.91■□□□□ 0.78
GAREM2-201ENST00000401533 GAKO14976 1311 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 PI4K2BG5E9Z4 385 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 STAM2O75886 525 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 NR3C2P08235 984 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 CCDC137Q6PK04 289 aaKnown RBP19.91■□□□□ 0.78
GAREM2-201ENST00000401533 CBWD2Q8IUF1 395 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 DNAJC19Q96DA6 116 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 AKT3Q9Y243 479 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 SIK3Q9Y2K2 1263 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 ALG6Q9Y672 507 aa19.91■□□□□ 0.78
GAREM2-201ENST00000401533 NUP98P52948 1817 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 ATP2A2P16615 1042 aaKnown RBP19.9■□□□□ 0.78
GAREM2-201ENST00000401533 FGFR4P22455 802 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 HOXA10P31260 410 aaPredicted RBP19.9■□□□□ 0.78
GAREM2-201ENST00000401533 KCTD2Q14681 263 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 SNRNP35Q16560 246 aaKnown RBP19.9■□□□□ 0.78
GAREM2-201ENST00000401533 DACT2Q5SW24 774 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 DNAJC24Q6P3W2 148 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 ZNF354CQ86Y25 554 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.9■□□□□ 0.78
GAREM2-201ENST00000401533 USP38Q8NB14 1042 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 FBXL13Q8NEE6 735 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 ZWILCHQ9H900 591 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 GOLGA8MH3BSY2 632 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 CLDN3O15551 220 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 JAK3P52333 1124 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 PALM2Q8IXS6 379 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 C7orf31Q8N865 590 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 KCND1Q9NSA2 647 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 Q3C1V9 767 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 TMEM119Q4V9L6 283 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 MAIP1Q8WWC4 291 aa19.9■□□□□ 0.78
GAREM2-201ENST00000401533 MEIS2O14770 477 aa19.89■□□□□ 0.78
GAREM2-201ENST00000401533 MYBL2P10244 700 aa19.89■□□□□ 0.78
GAREM2-201ENST00000401533 ITGA4P13612 1032 aa19.89■□□□□ 0.78
GAREM2-201ENST00000401533 CLUL1Q15846 466 aa19.89■□□□□ 0.78
GAREM2-201ENST00000401533 FAM133BQ5BKY9 247 aaKnown RBP19.89■□□□□ 0.78
GAREM2-201ENST00000401533 LRRC55Q6ZSA7 311 aa19.89■□□□□ 0.78
GAREM2-201ENST00000401533 PPP2R5AQ15172 486 aa19.89■□□□□ 0.77
GAREM2-201ENST00000401533 TMED2Q15363 201 aa19.89■□□□□ 0.77
GAREM2-201ENST00000401533 DCPSQ96C86 337 aaKnown RBP19.89■□□□□ 0.77
GAREM2-201ENST00000401533 ATP6V0A4Q9HBG4 840 aa19.89■□□□□ 0.77
GAREM2-201ENST00000401533 CNOT7Q9UIV1 285 aaKnown RBP19.89■□□□□ 0.77
GAREM2-201ENST00000401533 TTLL3Q9Y4R7 772 aa19.89■□□□□ 0.77
GAREM2-201ENST00000401533 H0YCG3 227 aa19.89■□□□□ 0.77
GAREM2-201ENST00000401533 HOXA7P31268 230 aaPredicted RBP19.89■□□□□ 0.77
GAREM2-201ENST00000401533 HDLBPQ00341 1268 aaKnown RBP19.89■□□□□ 0.77
GAREM2-201ENST00000401533 KCNMA1Q12791 1236 aa19.89■□□□□ 0.77
GAREM2-201ENST00000401533 ZRSR2Q15696 482 aaKnown RBP19.89■□□□□ 0.77
GAREM2-201ENST00000401533 MEA1Q16626 185 aa19.89■□□□□ 0.77
GAREM2-201ENST00000401533 CERKQ8TCT0 537 aa19.89■□□□□ 0.77
GAREM2-201ENST00000401533 CDHR1Q96JP9 859 aa19.89■□□□□ 0.77
GAREM2-201ENST00000401533 ELAC2Q9BQ52 826 aaKnown RBP19.89■□□□□ 0.77
GAREM2-201ENST00000401533 ACP6Q9NPH0 428 aa19.89■□□□□ 0.77
GAREM2-201ENST00000401533 WDR91A4D1P6 747 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 SPDYE2BA6NHP3 402 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 HMGB1P1B2RPK0 211 aaPredicted RBP19.88■□□□□ 0.77
GAREM2-201ENST00000401533 SPDYE6P0CI01 402 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 CDO1Q16878 200 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 MMGT1Q8N4V1 131 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 CASKIN2Q8WXE0 1202 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 DOT1LQ8TEK3 1739 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 MCPH1Q8NEM0 835 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 TPCN2Q8NHX9 752 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 SLC20A1Q8WUM9 679 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 TCP11Q8WWU5 503 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 RNF8O76064 485 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 SLITRK3O94933 977 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 ZNF131P52739 623 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 DGKZQ13574 1117 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 WDR93Q6P2C0 686 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 POLR3CQ9BUI4 534 aaPredicted RBP19.88■□□□□ 0.77
GAREM2-201ENST00000401533 TXNDC16Q9P2K2 825 aa19.88■□□□□ 0.77
GAREM2-201ENST00000401533 GRID2IPA4D2P6 1211 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms