RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 MSL2Q9HCI7 577 aa6.13□□□□□ -1.43
SAMSN1-202ENST00000400564 TLR9Q9NR96 1032 aa6.13□□□□□ -1.43
SAMSN1-202ENST00000400564 DPP7Q9UHL4 492 aa6.13□□□□□ -1.43
SAMSN1-202ENST00000400564 ATP8A1Q9Y2Q0 1164 aa6.13□□□□□ -1.43
SAMSN1-202ENST00000400564 TSC22D4Q9Y3Q8 395 aa6.13□□□□□ -1.43
SAMSN1-202ENST00000400564 A0A1W2PR48 441 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 NRP2O60462 931 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 TMEM127O75204 238 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 STC2O76061 302 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 NRG3P56975 720 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 CDK17Q00537 523 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 CCDC178Q5BJE1 867 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 SPTY2D1Q68D10 685 aaPredicted RBP6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 MAMDC4Q6UXC1 1216 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 SPRED1Q7Z699 444 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 CMTM4Q8IZR5 234 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 TRIM8Q9BZR9 551 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 MCM8Q9UJA3 840 aa6.12□□□□□ -1.43
SAMSN1-202ENST00000400564 SUV39H1O43463 412 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 GPR3P46089 330 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 CDKN1CP49918 316 aaPredicted RBP6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 ERVK-21P61565 698 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 SRSF2Q01130 221 aaKnown RBP6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 AMPD3Q01432 767 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 SPIDRQ14159 915 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 TOR2AQ5JU69 321 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 FAM111BQ6SJ93 734 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 ABHD15Q6UXT9 468 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 TAS1R1Q7RTX1 841 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 SGMS1Q86VZ5 419 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 GLB1L2Q8IW92 636 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 SH3RF3Q8TEJ3 882 aaPredicted RBP6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 RSAD2Q8WXG1 361 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 EDAQ92838 391 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 TCF25Q9BQ70 676 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 TMX1Q9H3N1 280 aa6.11□□□□□ -1.43
SAMSN1-202ENST00000400564 MTSS1O43312 755 aa6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 PRAMEF4O60810 478 aa6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 CANXP27824 592 aaKnown RBP6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 CASRP41180 1078 aa6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 EVA1CP58658 441 aa6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 PUM1Q14671 1186 aaKnown RBP eCLIP6.1□□□□□ -1.435e-7■■■□□ 16.7
SAMSN1-202ENST00000400564 PRKD1Q15139 912 aaPredicted RBP6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 UBE3CQ15386 1083 aa6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 FAM214AQ32MH5 1076 aa6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 CNTD1Q8N815 330 aa6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 TSPEARQ8WU66 669 aa6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 ORAI2Q96SN7 254 aa6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 CDK5RAP1Q96SZ6 601 aaKnown RBP6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 CCM2LQ9NUG4 571 aaPredicted RBP6.1□□□□□ -1.43
SAMSN1-202ENST00000400564 CAPN14A8MX76 684 aa6.09□□□□□ -1.43
SAMSN1-202ENST00000400564 C1QTNF3-AMACRE9PGA6 284 aa6.09□□□□□ -1.43
SAMSN1-202ENST00000400564 HIBADHP31937 336 aaKnown RBP6.09□□□□□ -1.43
SAMSN1-202ENST00000400564 KRTAP1-1Q07627 177 aa6.09□□□□□ -1.43
SAMSN1-202ENST00000400564 FKBP15Q5T1M5 1219 aa6.09□□□□□ -1.43
SAMSN1-202ENST00000400564 KCNK18Q7Z418 384 aa6.09□□□□□ -1.43
SAMSN1-202ENST00000400564 FAM89AQ96GI7 184 aa6.09□□□□□ -1.43
SAMSN1-202ENST00000400564 ENKD1Q9H0I2 346 aa6.09□□□□□ -1.43
SAMSN1-202ENST00000400564 SLC5A4Q9NY91 659 aa6.09□□□□□ -1.43
SAMSN1-202ENST00000400564 TESMINQ9Y4I5 508 aa6.09□□□□□ -1.43
SAMSN1-202ENST00000400564 PLSCR1O15162 318 aa6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 LTA4HP09960 611 aaKnown RBP6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 OSMP13725 252 aa6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 NPEPPSP55786 919 aa6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 MRPS9P82933 396 aaKnown RBP6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 FAM50AQ14320 339 aaKnown RBP6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 ELAVL1Q15717 326 aaKnown RBP6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 MUM1Q2TAK8 710 aa6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 ELOA2Q8IYF1 753 aaPredicted RBP6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 OR5M3Q8NGP4 307 aa6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 AUTS2Q8WXX7 1259 aa6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 EXTL1Q92935 676 aa6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 ARL8AQ96BM9 186 aa6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 RAX2Q96IS3 184 aa6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 ZNF512Q96ME7 567 aaPredicted RBP6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 DNAJC28Q9NX36 388 aa6.08□□□□□ -1.44
SAMSN1-202ENST00000400564 MATN3O15232 486 aa6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 CTSSP25774 331 aa6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 HHEXQ03014 270 aa6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 FAPQ12884 760 aa6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 USP39Q53GS9 565 aaKnown RBP6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 Q6ZRM9 215 aa6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 LILRA3Q8N6C8 439 aaPredicted RBP6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 PRPF38AQ8NAV1 312 aaKnown RBP6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 GLB1L3Q8NCI6 653 aaPredicted RBP6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 SNX33Q8WV41 574 aa6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 MPHOSPH9Q99550 1183 aa6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 MYRFQ9Y2G1 1151 aa6.07□□□□□ -1.44
SAMSN1-202ENST00000400564 PPM1GO15355 546 aaPredicted RBP6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 TNFRSF1AP19438 455 aa6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 IARSP41252 1262 aaKnown RBP6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 DUSP2Q05923 314 aa6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 KLF1Q13351 362 aaPredicted RBP6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 CBARPQ8N350 705 aaPredicted RBP6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 MB21D1Q8N884 522 aa6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 SLC2A13Q96QE2 648 aa6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 CCDC8Q9H0W5 538 aaPredicted RBP6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 IFT122Q9HBG6 1241 aa6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 DMRT3Q9NQL9 472 aa6.06□□□□□ -1.44
SAMSN1-202ENST00000400564 COL4A3BPQ9Y5P4 624 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms