RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 FAM13AO94988 1023 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 ZNF202O95125 648 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 CSF2RAP15509 400 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 GARTP22102 1010 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 SLC27A1Q6PCB7 646 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 ZNF720Q7Z2F6 126 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 SLC9A9Q8IVB4 645 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 RASSF8Q8NHQ8 419 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 DEPTORQ8TB45 409 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 NLRP7Q8WX94 980 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 MRPL9Q9BYD2 267 aaKnown RBP8.29□□□□□ -1.08
USP16-204ENST00000399976 TMX1Q9H3N1 280 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 PLEKHA5Q9HAU0 1116 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 KMT5AQ9NQR1 393 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 ST3GAL5Q9UNP4 418 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 DERAQ9Y315 318 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 A0A087WZ62 844 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 ABLIM1O14639 778 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 ZBTB39O15060 712 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 NDUFA8P51970 172 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 MCL1Q07820 350 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 DRP2Q13474 957 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 POSTNQ15063 836 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 FAM102BQ5T8I3 360 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 LRRC71Q8N4P6 559 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 RNF149Q8NC42 400 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 SPRYD3Q8NCJ5 442 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 TMEM40Q8WWA1 233 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 FDXACB1Q9BRP7 624 aaPredicted RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 PLVAPQ9BX97 442 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 PRDM5Q9NQX1 630 aaPredicted RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 GIT1Q9Y2X7 761 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 TSC2P49815 1807 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 C5orf67F2Z3F1 127 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 ENPP3O14638 875 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 SMC2O95347 1197 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 VTNP04004 478 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 POU3F3P20264 500 aaPredicted RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 HOXA11P31270 313 aaPredicted RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 ZC3H3Q8IXZ2 948 aaKnown RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 LINC01599Q8WXQ3 324 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 BSNDQ8WZ55 320 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 TMEM143Q96AN5 459 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.28□□□□□ -1.083e-9■■■■□ 22
USP16-204ENST00000399976 UBE2OQ9C0C9 1292 aaKnown RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 GOLPH3LQ9H4A5 285 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 AGO3Q9H9G7 860 aaKnown RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 KIAA1586Q9HCI6 787 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 LMBRD1Q9NUN5 540 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 KANSL3Q9P2N6 904 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 TMEM150BA6NC51 233 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 TOM1L1O75674 476 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 ERLIN2O94905 339 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 LDHAP00338 332 aaKnown RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 PRKCBP05771 671 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 ZSCAN20P17040 1043 aaPredicted RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 GRM5P41594 1212 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 CEBPZQ03701 1054 aaKnown RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 COASYQ13057 564 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 ACCSQ96QU6 501 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 ACO2Q99798 780 aaKnown RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 TMEM175Q9BSA9 504 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 PPP1R12CQ9BZL4 782 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 FAM49AQ9H0Q0 323 aaPredicted RBP8.28□□□□□ -1.08
USP16-204ENST00000399976 LMAN2LQ9H0V9 348 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 SUGCTQ9HAC7 445 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 PANK4Q9NVE7 773 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 LMCD1Q9NZU5 365 aa8.28□□□□□ -1.08
USP16-204ENST00000399976 ADGRA3Q8IWK6 1321 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 FSD2A1L4K1 749 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 KCNJ6P48051 423 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 STRN3Q13033 797 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 KIZQ2M2Z5 673 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 UBXN11Q5T124 520 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 MPZL3Q6UWV2 235 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 ZNF365Q70YC5 407 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 TAS1R3Q7RTX0 852 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 HAUS6Q7Z4H7 955 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 ECHDC2Q86YB7 292 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 FAM178BQ8IXR5 827 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 GUF1Q8N442 669 aaKnown RBP8.27□□□□□ -1.09
USP16-204ENST00000399976 DBF4BQ8NFT6 615 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 CLP1Q92989 425 aaKnown RBP8.27□□□□□ -1.09
USP16-204ENST00000399976 DHX58Q96C10 678 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 OSMRQ99650 979 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 TMEM117Q9H0C3 514 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 SERTAD1Q9UHV2 236 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 TBX20Q9UMR3 447 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 SLC4A7Q9Y6M7 1214 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 PCNTO95613 3336 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 K7ERI5 159 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 DGKIO75912 1065 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 GJB5O95377 273 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 RB1P06400 928 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 PRPF4BQ13523 1007 aaKnown RBP8.27□□□□□ -1.09
USP16-204ENST00000399976 LONRF3Q496Y0 759 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 CATSPER4Q7RTX7 472 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms