RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 CACNA1FO60840 1977 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 LY75O60449 1722 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 PI4K2BG5E9Z4 385 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 KINO60870 393 aaKnown RBP6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 AOC2O75106 756 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 DGKIO75912 1065 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 KIF20AO95235 890 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZBED1O96006 694 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 ADRB2P07550 413 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 HADHAP40939 763 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 LIFRP42702 1097 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 ITPK1Q13572 414 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZNF267Q14586 743 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 KRTCAP3Q53RY4 240 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 PRR16Q569H4 304 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 FBXW10Q5XX13 1052 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 FAM117BQ6P1L5 589 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 CTR9Q6PD62 1173 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 ARHGEF18Q6ZSZ5 1173 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 ADGRA1Q86SQ6 560 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 LCORLQ8N3X6 602 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 MYO19Q96H55 970 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 TEX13BQ9BXU2 312 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 CLIP2Q9UDT6 1046 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 LRCH1Q9Y2L9 728 aa6.8□□□□□ -1.32
TRAPPC13-202ENST00000399438 SH3TC1Q8TE82 1336 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 TNS1Q9HBL0 1735 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 M0QX08 132 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 SMC2O95347 1197 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 KRT9P35527 623 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 CTCFP49711 727 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 HTRA3P83110 453 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 ANKDD1AQ495B1 522 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 RPUSD3Q6P087 351 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 RNF168Q8IYW5 571 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 AHI1Q8N157 1196 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 CACTINQ8WUQ7 758 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 STAMQ92783 540 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 CNDP1Q96KN2 507 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 RIPOR3Q96MK2 946 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 NUP88Q99567 741 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 VPS11Q9H270 941 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 EHMT1Q9H9B1 1298 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 VTA1Q9NP79 307 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 NPHS2Q9NP85 383 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 TCF7L2Q9NQB0 619 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 SRP68Q9UHB9 627 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 FOXD3Q9UJU5 478 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 BOLA1Q9Y3E2 137 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 GOLGA6L19H0YKK7 550 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 NMT2O60551 498 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 TADA3O75528 432 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 PCCAP05165 728 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 POLBP06746 335 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 ABCB4P21439 1286 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 DYNLL1P63167 89 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 MLLT1Q03111 559 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 CENPCQ03188 943 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 TRDNQ13061 729 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 USP4Q13107 963 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 ZNF460Q14592 562 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 C5orf22Q49AR2 442 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 HGSNATQ68CP4 663 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 ALKBH5Q6P6C2 394 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 KDELC1Q6UW63 502 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 CCDC116Q8IYX3 515 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 KLHL23Q8NBE8 558 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 SLC39A3Q9BRY0 314 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 TXLNGYQ9BZA5 131 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 IFT22Q9H7X7 185 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 PAPOLBQ9NRJ5 636 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 LRP2BPQ9P2M1 347 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 SLC30A1Q9Y6M5 507 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 MROH7-TTC4A0A0A0MT08 1334 aa6.79□□□□□ -1.32
TRAPPC13-202ENST00000399438 A0A087WV62 115 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 IFIT3O14879 490 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 XPOTO43592 962 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 CKMT1AP12532 417 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 MCM5P33992 734 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 MTHFRP42898 656 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 CRKLP46109 303 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 METAP2P50579 478 aaKnown RBP eCLIP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 NR5A1Q13285 461 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 CAMK2GQ13555 558 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 MAP7Q14244 749 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 CLUL1Q15846 466 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 YOD1Q5VVQ6 348 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 DSTYKQ6XUX3 929 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 RUFY4Q6ZNE9 571 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 NUP54Q7Z3B4 507 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 MB21D2Q8IYB1 491 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 USP6NLQ92738 828 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 CHFRQ96EP1 664 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 FERD3LQ96RJ6 166 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 DSCC1Q9BVC3 393 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 APOL5Q9BWW9 433 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 NAPBQ9H115 298 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 TRIM39Q9HCM9 518 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 NMRK2Q9NPI5 230 aa6.78□□□□□ -1.32
TRAPPC13-202ENST00000399438 MARK1Q9P0L2 795 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms