RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 HABP4Q5JVS0 413 aaKnown RBP19.47■□□□□ 0.71
CTNS-203ENST00000399306 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.47■□□□□ 0.71
CTNS-203ENST00000399306 CCDC65Q8IXS2 484 aa19.47■□□□□ 0.71
CTNS-203ENST00000399306 MYCT1Q8N699 235 aa19.47■□□□□ 0.71
CTNS-203ENST00000399306 TMEM161BQ8NDZ6 487 aa19.47■□□□□ 0.71
CTNS-203ENST00000399306 CNNM3Q8NE01 707 aa19.47■□□□□ 0.71
CTNS-203ENST00000399306 SERTAD1Q9UHV2 236 aa19.47■□□□□ 0.71
CTNS-203ENST00000399306 PIN4Q9Y237 131 aaKnown RBP19.47■□□□□ 0.71
CTNS-203ENST00000399306 PCDHA11Q9Y5I1 949 aa19.47■□□□□ 0.71
CTNS-203ENST00000399306 TMEM265A0A087WTH1 108 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 A0A1B0GUA9 196 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 PVALEFA0A1B0GWK0 134 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 TRAK2O60296 914 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 CSDE1O75534 798 aaKnown RBP19.46■□□□□ 0.71
CTNS-203ENST00000399306 ZNF202O95125 648 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 PRKCBP05771 671 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 FGFR4P22455 802 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 HTRA4P83105 476 aaPredicted RBP19.46■□□□□ 0.71
CTNS-203ENST00000399306 FAM160A1Q05DH4 1040 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 ALCAMQ13740 583 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 LONRF3Q496Y0 759 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 DYMQ7RTS9 669 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 ELOA2Q8IYF1 753 aaPredicted RBP19.46■□□□□ 0.71
CTNS-203ENST00000399306 FMR1NBQ8N0W7 255 aaPredicted RBP19.46■□□□□ 0.71
CTNS-203ENST00000399306 ENGASEQ8NFI3 743 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 HVCN1Q96D96 273 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 TIGD1Q96MW7 591 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 FIZ1Q96SL8 496 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 RAD9AQ99638 391 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 GOLPH3LQ9H4A5 285 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 TMEM161AQ9NX61 479 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 LAMA3Q16787 3333 aa19.46■□□□□ 0.71
CTNS-203ENST00000399306 SFI1A8K8P3 1242 aa19.45■□□□□ 0.7
CTNS-203ENST00000399306 ARF4P18085 180 aaPredicted RBP19.45■□□□□ 0.7
CTNS-203ENST00000399306 UBE2HP62256 183 aa19.45■□□□□ 0.7
CTNS-203ENST00000399306 PRPF4BQ13523 1007 aaKnown RBP19.45■□□□□ 0.7
CTNS-203ENST00000399306 FAM178BQ8IXR5 827 aa19.45■□□□□ 0.7
CTNS-203ENST00000399306 MYOCDQ8IZQ8 938 aa19.45■□□□□ 0.7
CTNS-203ENST00000399306 GBP4Q96PP9 640 aa19.45■□□□□ 0.7
CTNS-203ENST00000399306 POLD4Q9HCU8 107 aa19.45■□□□□ 0.7
CTNS-203ENST00000399306 INSL6Q9Y581 213 aa19.45■□□□□ 0.7
CTNS-203ENST00000399306 LAMA2P24043 3122 aaKnown RBP19.44■□□□□ 0.7
CTNS-203ENST00000399306 N4BP3O15049 544 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 SLC16A4O15374 487 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 HOXA2O43364 376 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 GTF2BQ00403 316 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 CACNB1Q02641 598 aaPredicted RBP19.44■□□□□ 0.7
CTNS-203ENST00000399306 STRN3Q13033 797 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 TWF2Q6IBS0 349 aaKnown RBP19.44■□□□□ 0.7
CTNS-203ENST00000399306 SLC27A1Q6PCB7 646 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 KRBA2Q6ZNG9 492 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 UNC13DQ70J99 1090 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 HAUS6Q7Z4H7 955 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 APBB1IPQ7Z5R6 666 aaPredicted RBP19.44■□□□□ 0.7
CTNS-203ENST00000399306 MRPL10Q7Z7H8 261 aaKnown RBP19.44■□□□□ 0.7
CTNS-203ENST00000399306 ZNF598Q86UK7 904 aaKnown RBP19.44■□□□□ 0.7
CTNS-203ENST00000399306 ECHDC2Q86YB7 292 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 PAGE5Q96GU1 130 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 MRPL4Q9BYD3 311 aaKnown RBP19.44■□□□□ 0.7
CTNS-203ENST00000399306 PANK4Q9NVE7 773 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 ZMYM2Q9UBW7 1377 aa19.44■□□□□ 0.7
CTNS-203ENST00000399306 GTPBP6O43824 516 aaPredicted RBP19.43■□□□□ 0.7
CTNS-203ENST00000399306 PIGRP01833 764 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 EHHADHQ08426 723 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 SNW1Q13573 536 aaKnown RBP19.43■□□□□ 0.7
CTNS-203ENST00000399306 HERC4Q5GLZ8 1057 aaPredicted RBP19.43■□□□□ 0.7
CTNS-203ENST00000399306 ZPBP2Q6X784 338 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 TAS1R3Q7RTX0 852 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 ZNF720Q7Z2F6 126 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 SP7Q8TDD2 431 aaPredicted RBP19.43■□□□□ 0.7
CTNS-203ENST00000399306 PGBD4Q96DM1 585 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 KIFC3Q9BVG8 833 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 STRA6Q9BX79 667 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 RC3H2Q9HBD1 1191 aaKnown RBP19.43■□□□□ 0.7
CTNS-203ENST00000399306 FAM105AQ9NUU6 356 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 MSRAQ9UJ68 235 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 TNFSF13BQ9Y275 285 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 PCDHB7Q9Y5E2 793 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 GBF1Q92538 1859 aa19.43■□□□□ 0.7
CTNS-203ENST00000399306 K7ENM7 598 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 PPP1R37O75864 691 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 DGKIO75912 1065 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 IDEP14735 1019 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 ASIC1P78348 528 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 DCAF4L1Q3SXM0 396 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 UBXN11Q5T124 520 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 STXBP4Q6ZWJ1 553 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 SFR1Q86XK3 245 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 HACE1Q8IYU2 909 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 ZNF689Q96CS4 500 aaPredicted RBP19.42■□□□□ 0.7
CTNS-203ENST00000399306 ACO2Q99798 780 aaKnown RBP19.42■□□□□ 0.7
CTNS-203ENST00000399306 ADPGKQ9BRR6 497 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 ZBED2Q9BTP6 218 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 ZHX3Q9H4I2 956 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 UBN1Q9NPG3 1134 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 LRFN2Q9ULH4 789 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 PCDHB13Q9Y5F0 798 aa19.42■□□□□ 0.7
CTNS-203ENST00000399306 B4GALT5O43286 388 aa19.41■□□□□ 0.7
CTNS-203ENST00000399306 TLL1O43897 1013 aa19.41■□□□□ 0.7
CTNS-203ENST00000399306 COASYQ13057 564 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms