RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 KRT17Q04695 432 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 CUL4AQ13619 759 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 ECM1Q16610 540 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 CDCA2Q69YH5 1023 aaPredicted RBP16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 PADI6Q6TGC4 694 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 EP400NLQ6ZTU2 488 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 SNX29Q8TEQ0 813 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 CDCA3Q99618 268 aaPredicted RBP16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 CSRNP2Q9H175 543 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 RSAD1Q9HA92 442 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 NGRNQ9NPE2 291 aaKnown RBP16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 UBN1Q9NPG3 1134 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 GPRC5CQ9NQ84 441 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 TBC1D13Q9NVG8 400 aa16.49■□□□□ 0.23
SMIM11A-203ENST00000399299 TBX10O75333 385 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 PBX3P40426 434 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 NRIP1P48552 1158 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 BCAR1P56945 870 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 ERVFC1P60507 584 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 ATP2C1P98194 919 aaPredicted RBP16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 LARP1BQ659C4 914 aaKnown RBP16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 DTHD1Q6ZMT9 781 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 URGCPQ8TCY9 931 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 MICAL1Q8TDZ2 1067 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 PRIMPOLQ96LW4 560 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 IGFLR1Q9H665 355 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 KANSL3Q9P2N6 904 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 KIAA1024Q9UPX6 916 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 PCDHGC5Q9Y5F6 944 aa16.48■□□□□ 0.23
SMIM11A-203ENST00000399299 LRRIQ4A6NIV6 560 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 INPPL1O15357 1258 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 LINC01565O15544 149 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 ZC3H11AO75152 810 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 IL9P15248 144 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 ARF4P18085 180 aaPredicted RBP16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 RNASELQ05823 741 aaKnown RBP16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 DLX2Q07687 328 aaPredicted RBP16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 PPP2R5AQ15172 486 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 IL17AQ16552 155 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 FAM187BQ17R55 369 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 LONRF3Q496Y0 759 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 KRT79Q5XKE5 535 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 ARL6IP4Q66PJ3 421 aaKnown RBP16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 MAEAQ7L5Y9 396 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 ZBTB8OSQ8IWT0 167 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 FAM178BQ8IXR5 827 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 SMG8Q8ND04 991 aaKnown RBP16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 CPB2Q96IY4 423 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 TCF25Q9BQ70 676 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 C2orf40Q9H1Z8 148 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 NRDE2Q9H7Z3 1164 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 TLE6Q9H808 572 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 ENTPD7Q9NQZ7 604 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 DDX19AQ9NUU7 478 aaKnown RBP16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 PRMT7Q9NVM4 692 aaPredicted RBP16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 INPP5FQ9Y2H2 1132 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 IPPQ9Y573 584 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 ZMYM2Q9UBW7 1377 aa16.47■□□□□ 0.23
SMIM11A-203ENST00000399299 A0A1B0GUA9 196 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 ITGA4P13612 1032 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 NAMPTP43490 491 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 NDUFV1P49821 464 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 SMAD4Q13485 552 aaKnown RBP16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 DUSP6Q16828 381 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 SLC27A1Q6PCB7 646 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 BRAPQ7Z569 592 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 KCTD17Q8N5Z5 321 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 KIFAP3Q92845 792 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 TMEM169Q96HH4 297 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 MSLNLQ96KJ4 702 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 EIF2AQ9BY44 585 aaKnown RBP16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 FZD8Q9H461 694 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 PRKAG3Q9UGI9 489 aa16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 TDRD15B5MCY1 1934 aaKnown RBP16.46■□□□□ 0.23
SMIM11A-203ENST00000399299 PP2D1A8MPX8 630 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 MBTPS2O43462 519 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 EYA4O95677 639 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 GLP2RO95838 553 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 GALTP07902 379 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 PDCP20941 246 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 SMAD2Q15796 467 aaKnown RBP16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 HYIQ5T013 277 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 PLPP4Q5VZY2 271 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 TMC7Q7Z402 723 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 RBM23Q86U06 439 aaKnown RBP16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 HACE1Q8IYU2 909 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 BSNDQ8WZ55 320 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 IGSF21Q96ID5 467 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 TMEM175Q9BSA9 504 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 MMTAG2Q9BU76 263 aaKnown RBP16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 TRIM6Q9C030 488 aaPredicted RBP16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 CLEC1BQ9P126 229 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 STK39Q9UEW8 545 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 CD207Q9UJ71 328 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 DNM3Q9UQ16 869 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 GIT1Q9Y2X7 761 aa16.45■□□□□ 0.22
SMIM11A-203ENST00000399299 C5orf42Q9H799 3197 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms