RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 C1orf112Q9NSG2 853 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 SLC37A4O43826 429 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 SPAG7O75391 227 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 CCDC137Q6PK04 289 aaKnown RBP15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 YTHDF3Q7Z739 585 aaKnown RBP15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 CFAP57Q96MR6 1250 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 TMEM120BA0PK00 339 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 PALM3A6NDB9 673 aaPredicted RBP15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 FOXP2O15409 715 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 CAND2O75155 1236 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 HAUS5O94927 633 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 MKRN4PQ13434 485 aaPredicted RBP15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 KNOP1Q1ED39 458 aaKnown RBP15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 SLC10A5Q5PT55 438 aa15.61■□□□□ 0.09
RPRD1A-202ENST00000399022 HNRNPCP07910 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 NAB2Q15742 525 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 MAP3K21Q5TCX8 1036 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 GLYCTKQ8IVS8 523 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 MAML1Q92585 1016 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 CEP170P1Q96L14 293 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 FAM161BQ96MY7 647 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 ERGIC2Q96RQ1 377 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 NUF2Q9BZD4 464 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 ARHGAP20Q9P2F6 1191 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 SCAF8Q9UPN6 1271 aaKnown RBP15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 SYNGAP1Q96PV0 1343 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 TRIM49P0CI25 452 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 TRIM49CP0CI26 452 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 PEX3P56589 373 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 LAMB3Q13751 1172 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 SEPT9Q9UHD8 586 aaPredicted RBP15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 DNAJC12Q9UKB3 198 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 ZNF233A6NK53 670 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 COPB2P35606 906 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 PPP4CP60510 307 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 PDIA5Q14554 519 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 PDXDC2PQ6P474 469 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 PPP4R3CPQ6ZMV5 832 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 MAK16Q9BXY0 300 aaKnown RBP15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 TRIM55Q9BYV6 548 aa15.6■□□□□ 0.09
RPRD1A-202ENST00000399022 MAN1A1P33908 653 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 MXI1P50539 228 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 ELF3P78545 371 aaPredicted RBP15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 AMPD2Q01433 879 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 AGGF1Q8N302 714 aaeCLIP15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 PIK3R5Q8WYR1 880 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 MTMR8Q96EF0 704 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 POLLQ9UGP5 575 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 NDUFB10O96000 172 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 ACTN1P12814 892 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 DDR1Q08345 913 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 NFIAQ12857 509 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 NME8Q8N427 588 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 ADAM33Q9BZ11 813 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 NMT1P30419 496 aaKnown RBP15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 MAPK4P31152 587 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 CHRNA3P32297 505 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 BFSP1Q12934 665 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 PTF1AQ7RTS3 328 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 ARHGAP18Q8N392 663 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 GRAMD1AQ96CP6 724 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 NT5C1BQ96P26 610 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 ABCB11O95342 1321 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 A0A1W2PQJ5 194 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 GCLMP48507 274 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 POLGP54098 1239 aaPredicted RBP15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 PMS1P54277 932 aaKnown RBP15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 HP1BP3Q5SSJ5 553 aaPredicted RBP15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 PPP1R18Q6NYC8 613 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 SMC1BQ8NDV3 1235 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 FAM20AQ96MK3 541 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 ACCSQ96QU6 501 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 PPARGC1AQ9UBK2 798 aaKnown RBP15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 MCM8Q9UJA3 840 aa15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 DIS3Q9Y2L1 958 aaKnown RBP15.59■□□□□ 0.09
RPRD1A-202ENST00000399022 NT5DC1Q5TFE4 455 aa15.58■□□□□ 0.09
RPRD1A-202ENST00000399022 SLC17A8Q8NDX2 589 aa15.58■□□□□ 0.09
RPRD1A-202ENST00000399022 FAM129AQ9BZQ8 928 aa15.58■□□□□ 0.09
RPRD1A-202ENST00000399022 KMT5AQ9NQR1 393 aa15.58■□□□□ 0.09
RPRD1A-202ENST00000399022 A0A087X0T9 212 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 MIF4GDA9UHW6 222 aaKnown RBP15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 DNAJC8O75937 253 aaPredicted RBP15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 GSTA1P08263 222 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 FAM228BP0C875 321 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 PLS3P13797 630 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 RHOT2Q8IXI1 618 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 METTL13Q8N6R0 699 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 RSAD2Q8WXG1 361 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 EIF2AK1Q9BQI3 630 aaKnown RBP15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 TLR10Q9BXR5 811 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 SAYSD1Q9NPB0 183 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 TRAPPC3O43617 180 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 INHBAP08476 426 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 UBTFL6P0CB48 400 aaPredicted RBP15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 GRIK5Q16478 980 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 NAALADL2Q58DX5 795 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 ZNF408Q9H9D4 720 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms