RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 LRRC43Q8N309 656 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 TPCN2Q8NHX9 752 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 ETNPPLQ8TBG4 499 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 MAP3K20Q9NYL2 800 aaKnown RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SPDYE3A6NKU9 549 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 CNGA1P29973 690 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PSMC2P35998 433 aaKnown RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SEC24CP53992 1094 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 IL9RQ01113 521 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PTK2Q05397 1052 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 ITGB3BPQ13352 177 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 C6orf118Q5T5N4 469 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 NT5DC3Q86UY8 548 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 TGFBRAP1Q8WUH2 860 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 GRAMD1AQ96CP6 724 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 FMO2Q99518 471 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 CENPKQ9BS16 269 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 DDX23Q9BUQ8 820 aaKnown RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 TMEM206Q9H813 350 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 C17orf75Q9HAS0 396 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 DUSP10Q9Y6W6 482 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 H0YCG3 227 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 O00370 1275 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PALMO75781 387 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 FAM13AO94988 1023 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 GAS8O95995 478 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PTP4A2Q12974 167 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 TMED2Q15363 201 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 NUGGCQ68CJ6 796 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 B3GNT9Q6UX72 402 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 PPP1R21Q6ZMI0 780 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 APLFQ8IW19 511 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-205ENST00000397611 SLC30A5Q8TAD4 765 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 LRRC15Q8TF66 581 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 TRIM10Q9UDY6 481 aa5.85□□□□□ -1.47
PTPRD-205ENST00000397611 ZNF185O15231 689 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 RBM5P52756 815 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 MAPK7Q13164 816 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 CYP1B1Q16678 543 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 RDM1Q8NG50 284 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 SMCR8Q8TEV9 937 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 ANLNQ9NQW6 1124 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 ANKIB1Q9P2G1 1089 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 HERC5Q9UII4 1024 aaKnown RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 SHANK3Q9BYB0 1731 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 MYO5AQ9Y4I1 1855 aaKnown RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 PHF20L1A8MW92 1017 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 ONECUT3O60422 494 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TRPA1O75762 1119 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TFRCP02786 760 aaKnown RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 HSPA2P54652 639 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 RTP1P59025 263 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 QRICH1Q2TAL8 776 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 ERMARDQ5T6L9 678 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TBC1D9BQ66K14 1250 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 DUPD1Q68J44 220 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 C3orf67Q6ZVT6 689 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TMC3Q7Z5M5 1100 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 ST13P4Q8IZP2 240 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TSEN2Q8NCE0 465 aaKnown RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 SH3RF3Q8TEJ3 882 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 CHMP6Q96FZ7 201 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 CYTH2Q99418 400 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 AVENQ9NQS1 362 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 LAMB2P55268 1798 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 NUP98P52948 1817 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 POTEMA6NI47 508 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TATDN1Q6P1N9 297 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 HDAC7Q8WUI4 952 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 LENG9Q96B70 501 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 DYNLL2Q96FJ2 89 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TXLNGYQ9BZA5 131 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TBK1Q9UHD2 729 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 KIAA1024Q9UPX6 916 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 A0A0U1RQJ8 604 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 EDIL3O43854 480 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 JAM2P57087 298 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 ZNF844Q08AG5 666 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TNIP1Q15025 636 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 HSP90AA5PQ58FG0 334 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TNFAIP8L3Q5GJ75 292 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TRAPPC3LQ5T215 181 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 USP17L2Q6R6M4 530 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 FAM186BQ8IYM0 893 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TAB3Q8N5C8 712 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 TEKT1Q969V4 418 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 RBM17Q96I25 401 aaKnown RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 ZC3H12CQ9C0D7 883 aaKnown RBP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 USTQ9Y2C2 406 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.84□□□□□ -1.47
PTPRD-205ENST00000397611 F8VZ95 297 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 ASAP2O43150 1006 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 RWDD2BP57060 319 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 BPIFB4P59827 614 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 KIF22Q14807 665 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 ARHGAP44Q17R89 818 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 KCNK18Q7Z418 384 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 FLAD1Q8NFF5 587 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 Q9H521 79 aa5.84□□□□□ -1.47
PTPRD-205ENST00000397611 MLXIPLQ9NP71 852 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms