RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 AADACL2Q6P093 401 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 RUFY4Q6ZNE9 571 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 SP8Q8IXZ3 490 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 UHMK1Q8TAS1 419 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 CERKQ8TCT0 537 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 ACER1Q8TDN7 264 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 WHAMMQ8TF30 809 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 CASKIN2Q8WXE0 1202 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 DYDC2Q96IM9 177 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 FAM84AQ96KN4 292 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 PRMT6Q96LA8 375 aaPredicted RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 EIF2AK1Q9BQI3 630 aaKnown RBP5.42□□□□□ -1.54
SSR1-202ENST00000397511 TMBIM4Q9HC24 238 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 KCNMB3Q9NPA1 279 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 FBXO28Q9NVF7 368 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 SLC12A4Q9UP95 1085 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 RABGAP1Q9Y3P9 1069 aa5.42□□□□□ -1.54
SSR1-202ENST00000397511 KDM3AQ9Y4C1 1321 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 MYH4Q9Y623 1939 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 DPPA5A6NC42 116 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 EVI5O60447 810 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ECEL1O95672 775 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 AFPP02771 609 aaKnown RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 NR3C1P04150 777 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 PRLRP16471 622 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ATP2A2P16615 1042 aaKnown RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 FLT3P36888 993 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 BYSLQ13895 437 aaKnown RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 RPS6KA1Q15418 735 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 NAB2Q15742 525 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 KIAA1755Q5JYT7 1200 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ANKRD20A2Q5SQ80 823 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 PPP1R15BQ5SWA1 713 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ACBD5Q5T8D3 534 aaPredicted RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 ANKRD20A1Q5TYW2 823 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ANKRD20A3Q5VUR7 823 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ZNF746Q6NUN9 644 aaPredicted RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 LRIG3Q6UXM1 1119 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 CPXCR1Q8N123 301 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 UBLCP1Q8WVY7 318 aaPredicted RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 NAF1Q96HR8 494 aaKnown RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 LRRC27Q9C0I9 530 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 WDR35Q9P2L0 1181 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 PI4KBQ9UBF8 816 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 NAGPAQ9UK23 515 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ZNF232Q9UNY5 417 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 PLAAQ9Y263 795 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ATF5Q9Y2D1 282 aaPredicted RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 MAST2Q6P0Q8 1798 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 TPD52L2O43399 206 aaKnown RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 ECE2O60344 883 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ONECUT3O60422 494 aaPredicted RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 FAM13AO94988 1023 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 PAEPP09466 180 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 SMARCA1P28370 1054 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ABL2P42684 1182 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 PPP2R2AP63151 447 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 SPIRE1Q08AE8 756 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 SFSWAPQ12872 951 aaKnown RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 NUGGCQ68CJ6 796 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 CHADLQ6NUI6 762 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 PEX26Q7Z412 305 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 IRF2BP2Q7Z5L9 587 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 PHLDB2Q86SQ0 1253 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 COL23A1Q86Y22 540 aaPredicted RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 PALB2Q86YC2 1186 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ZSWIM2Q8NEG5 633 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ETNPPLQ8TBG4 499 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 RAPGEF5Q92565 580 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 LENG9Q96B70 501 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 GLIS2Q9BZE0 524 aaPredicted RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 LRRC4CQ9HCJ2 640 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 WRAP73Q9P2S5 460 aaPredicted RBP5.41□□□□□ -1.54
SSR1-202ENST00000397511 SLC12A6Q9UHW9 1150 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 C2CD2Q9Y426 696 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 NR2E1Q9Y466 385 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 ASTN1O14525 1302 aa5.41□□□□□ -1.54
SSR1-202ENST00000397511 SSU72P8A0A1W2PR75 194 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 A6NJR5 290 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 hCG_1984214I3L0E3 225 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 KRIT1O00522 736 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 RAD17O75943 681 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 LCA5LO95447 670 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 BMP3P12645 472 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 NQO1P15559 274 aaKnown RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 CCNG1P51959 295 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 DLG4P78352 724 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 LACTBP83111 547 aaPredicted RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 ATP11AP98196 1134 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 SP4Q02446 784 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 ITIH4Q14624 930 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 LBRQ14739 615 aaKnown RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 SETDB1Q15047 1291 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 CBWD6Q4V339 395 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 CBWD3Q5JTY5 395 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 CBWD5Q5RIA9 395 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 ODR4Q5SWX8 454 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 MEI1Q5TIA1 1274 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 TRIM68Q6AZZ1 485 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 TSHZ1Q6ZSZ6 1077 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms