RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 DLK2Q6UY11 383 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 RPUSD2Q8IZ73 545 aaKnown RBP13.09□□□□□ -0.31
ITGA4-203ENST00000397033 RAB17Q9H0T7 212 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 SPATS2LQ9NUQ6 558 aaKnown RBP13.09□□□□□ -0.31
ITGA4-203ENST00000397033 HACL1Q9UJ83 578 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 GAKO14976 1311 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 SYNJ2BP-COX16A0A087WUM0 186 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 WNT10BO00744 389 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 SART1O43290 800 aaKnown RBP13.09□□□□□ -0.31
ITGA4-203ENST00000397033 CDC25CP30307 473 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 VAMP7P51809 220 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 SETDB1Q15047 1291 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 GDAP1Q8TB36 358 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 INTS2Q9H0H0 1204 aaKnown RBP13.09□□□□□ -0.31
ITGA4-203ENST00000397033 NKIRAS1Q9NYS0 192 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 COX16Q9P0S2 106 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
ITGA4-203ENST00000397033 MEIS2O14770 477 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 CSDE1O75534 798 aaKnown RBP13.08□□□□□ -0.32
ITGA4-203ENST00000397033 FGRP09769 529 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 CAP2P40123 477 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 NSFP46459 744 aaKnown RBP13.08□□□□□ -0.32
ITGA4-203ENST00000397033 AP1ARQ63HQ0 302 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 SCYL2Q6P3W7 929 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 MTMR8Q96EF0 704 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 MTMR9Q96QG7 549 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 PSMD1Q99460 953 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 DAAM1Q9Y4D1 1078 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 COL14A1Q05707 1796 aaKnown RBP13.08□□□□□ -0.32
ITGA4-203ENST00000397033 WDR64B1ANS9 1081 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 THAP12O43422 761 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 GALCP54803 685 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 TRADDQ15628 312 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 LBHD1Q9BQE6 289 aaPredicted RBP13.08□□□□□ -0.32
ITGA4-203ENST00000397033 DONSONQ9NYP3 566 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 TBK1Q9UHD2 729 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 PNMA2Q9UL42 364 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 STK24Q9Y6E0 443 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 ABCC6O95255 1503 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 NR3C2P08235 984 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 STX2P32856 288 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 ANKS1AQ92625 1134 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 IQCDQ96DY2 449 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 SGSM3Q96HU1 749 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 CELF4Q9BZC1 486 aaKnown RBP13.08□□□□□ -0.32
ITGA4-203ENST00000397033 TRIM7Q9C029 511 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 DNAJC18Q9H819 358 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 KLHL11Q9NVR0 708 aa13.08□□□□□ -0.32
ITGA4-203ENST00000397033 PIK3R2O00459 728 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 TMEM191BP0C7N4 346 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 LMNB1P20700 586 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 CCND2P30279 289 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 PBX1P40424 430 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 ZRSR2Q15696 482 aaKnown RBP13.07□□□□□ -0.32
ITGA4-203ENST00000397033 NUGGCQ68CJ6 796 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 KDM7AQ6ZMT4 941 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 SH3BP5LQ7L8J4 393 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 ALS2Q96Q42 1657 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 MYH2Q9UKX2 1941 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 PHRF1Q9P1Y6 1649 aaKnown RBP13.07□□□□□ -0.32
ITGA4-203ENST00000397033 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 ADCY8P40145 1251 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 ZBTB16Q05516 673 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 BSPRYQ5W0U4 402 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 NAIF1Q69YI7 327 aaPredicted RBP13.07□□□□□ -0.32
ITGA4-203ENST00000397033 CYP4F22Q6NT55 531 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 TAOK1Q7L7X3 1001 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 SYT2Q8N9I0 419 aaPredicted RBP13.07□□□□□ -0.32
ITGA4-203ENST00000397033 PPP1R13LQ8WUF5 828 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 BTBD6Q96KE9 485 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 MPHOSPH6Q99547 160 aaKnown RBP13.07□□□□□ -0.32
ITGA4-203ENST00000397033 C11orf70Q9BRQ4 267 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.07□□□□□ -0.32
ITGA4-203ENST00000397033 TTI1O43156 1089 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 MAPK4P31152 587 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 HSD17B3P37058 310 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 KCTD2Q14681 263 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 EPHA7Q15375 998 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 SLC18A3Q16572 532 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 TMEM270Q6UE05 265 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 ARHGEF2Q92974 986 aaKnown RBP13.07□□□□□ -0.32
ITGA4-203ENST00000397033 CHMP6Q96FZ7 201 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 ERGIC2Q96RQ1 377 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 FAM49AQ9H0Q0 323 aaPredicted RBP13.07□□□□□ -0.32
ITGA4-203ENST00000397033 ELP3Q9H9T3 547 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 BZW2Q9Y6E2 419 aaKnown RBP13.07□□□□□ -0.32
ITGA4-203ENST00000397033 TRPM3Q9HCF6 1732 aaPredicted RBP13.07□□□□□ -0.32
ITGA4-203ENST00000397033 LRRC37A3O60309 1634 aa13.07□□□□□ -0.32
ITGA4-203ENST00000397033 PARP4Q9UKK3 1724 aaKnown RBP13.06□□□□□ -0.32
ITGA4-203ENST00000397033 H0Y3Z8 333 aa13.06□□□□□ -0.32
ITGA4-203ENST00000397033 DIAPH2O60879 1101 aa13.06□□□□□ -0.32
ITGA4-203ENST00000397033 MFAP3P55082 362 aa13.06□□□□□ -0.32
ITGA4-203ENST00000397033 KIF2BQ8N4N8 673 aa13.06□□□□□ -0.32
ITGA4-203ENST00000397033 MSTO1Q9BUK6 570 aa13.06□□□□□ -0.32
ITGA4-203ENST00000397033 TMEM206Q9H813 350 aa13.06□□□□□ -0.32
ITGA4-203ENST00000397033 TOPORSQ9NS56 1045 aaPredicted RBP13.06□□□□□ -0.32
ITGA4-203ENST00000397033 AKT3Q9Y243 479 aa13.06□□□□□ -0.32
ITGA4-203ENST00000397033 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.06□□□□□ -0.32
ITGA4-203ENST00000397033 PDXKO00764 312 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms