RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ELMSAN1Q6PJG2 1045 aa14.82□□□□□ -0.04
COL4A3-202ENST00000396578 MARK3P27448 753 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ALDH18A1P54886 795 aaKnown RBP14.81□□□□□ -0.04
COL4A3-202ENST00000396578 SLITRK6Q9H5Y7 841 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 MORC2Q9Y6X9 1032 aaPredicted RBP14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ARIH2O95376 493 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 LRRC14Q15048 493 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 CEP78Q5JTW2 689 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ITPRIPL1Q6GPH6 555 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 SLC30A9Q6PML9 568 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ZNF280CQ8ND82 737 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 LZTS3O60299 673 aaPredicted RBP14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ZNF189O75820 626 aaPredicted RBP14.81□□□□□ -0.04
COL4A3-202ENST00000396578 PRAMEP78395 509 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ASXL2Q76L83 1435 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ENO1P06733 434 aaKnown RBP14.81□□□□□ -0.04
COL4A3-202ENST00000396578 KRT16P08779 473 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 JAK3P52333 1124 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 HSPA2P54652 639 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 DAB2IPQ5VWQ8 1189 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 CYGBQ8WWM9 190 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ZSWIM5Q9P217 1185 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 FOXP2O15409 715 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 TYK2P29597 1187 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 HIF1AQ16665 826 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 UBE2SQ16763 222 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ZNF556Q9HAH1 456 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 DIABLOQ9NR28 239 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 CLDN3O15551 220 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 SLC9A1P19634 815 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 TMEM270Q6UE05 265 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
COL4A3-202ENST00000396578 ARL2BPQ9Y2Y0 163 aa14.81□□□□□ -0.04
COL4A3-202ENST00000396578 NR3C1P04150 777 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 KIF2CQ99661 725 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 MRPL1Q9BYD6 325 aaKnown RBP14.8□□□□□ -0.04
COL4A3-202ENST00000396578 TMEM245Q9H330 911 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 SELENONQ9NZV5 590 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 ERBB4Q15303 1308 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 MPP6Q9NZW5 540 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 CAB39Q9Y376 341 aaPredicted RBP14.8□□□□□ -0.04
COL4A3-202ENST00000396578 ATP10BO94823 1461 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 PPEF1O14829 653 aaPredicted RBP14.8□□□□□ -0.04
COL4A3-202ENST00000396578 PRPF4O43172 522 aaKnown RBP eCLIP14.8□□□□□ -0.04
COL4A3-202ENST00000396578 CTTNQ14247 550 aaKnown RBP14.8□□□□□ -0.04
COL4A3-202ENST00000396578 CD2BP2O95400 341 aaKnown RBP14.8□□□□□ -0.04
COL4A3-202ENST00000396578 KCNA3P22001 575 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 KDSRQ06136 332 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 KCNH2Q12809 1159 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 NCAPHQ15003 741 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 RABGAP1LQ5R372 815 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 SPATA21Q7Z572 469 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 UNC5CLQ8IV45 518 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 CLEC4FQ8N1N0 589 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 SLC9A2Q9UBY0 812 aa14.8□□□□□ -0.04
COL4A3-202ENST00000396578 TNFAIP2Q03169 654 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 DNAL1Q4LDG9 190 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 SLC10A5Q5PT55 438 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 ACAP3Q96P50 834 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 BHMT2Q9H2M3 363 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 STMN3Q9NZ72 180 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 TTC23LQ6PF05 361 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 PPP1R16BQ96T49 567 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 MAD2L2Q9UI95 211 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 MOSPD1Q9UJG1 213 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 KCNA6P17658 529 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 GNA15P30679 374 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 TAP1Q03518 808 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 TRIM72Q6ZMU5 477 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 FLAD1Q8NFF5 587 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 PPP1R36Q96LQ0 422 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 SP110Q9HB58 689 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 AIPL1Q9NZN9 384 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 KIAA0556O60303 1618 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 ZNF394Q53GI3 561 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 OLFML2BQ68BL8 750 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 POTEAQ6S8J7 498 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 C16orf89Q6UX73 402 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 GIMAP8Q8ND71 665 aaPredicted RBP14.79□□□□□ -0.04
COL4A3-202ENST00000396578 SH3GL2Q99962 352 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 SYTL2Q9HCH5 934 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 TLR7Q9NYK1 1049 aaKnown RBP14.79□□□□□ -0.04
COL4A3-202ENST00000396578 UBN2Q6ZU65 1347 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 NBNO60934 754 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 SERPINB1P30740 379 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 DYNLL1P63167 89 aaKnown RBP14.79□□□□□ -0.04
COL4A3-202ENST00000396578 SLC27A3Q5K4L6 730 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 CNPY4Q8N129 248 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 AGR3Q8TD06 166 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 TMEM161AQ9NX61 479 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 PFASO15067 1338 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 PEG3Q9GZU2 1588 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 KCNA2P16389 499 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 LIFRP42702 1097 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 ARID5BQ14865 1188 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 EME1Q96AY2 570 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 DHX36Q9H2U1 1008 aaKnown RBP14.79□□□□□ -0.04
COL4A3-202ENST00000396578 SFI1A8K8P3 1242 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 RUNX1T1Q06455 604 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 RHOT1Q8IXI2 618 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms