RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 AGTPBP1Q9UPW5 1226 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 TISP43B9A030 160 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 GTF2H1P32780 548 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 USP8P40818 1118 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 RFC5P40937 340 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 CREG2Q8IUH2 290 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 GPD1LQ8N335 351 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 CDCA5Q96FF9 252 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 FAM167AQ96KS9 214 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 TLR10Q9BXR5 811 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 SALL4Q9UJQ4 1053 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 ZNF233A6NK53 670 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 ENPEPQ07075 957 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 WDR78Q5VTH9 848 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 SLFN12LQ6IEE8 588 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 SEPT1Q8WYJ6 367 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 PSMB7Q99436 277 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 KIFC3Q9BVG8 833 aa17.49■□□□□ 0.39
SNX6-202ENST00000396526 MAFBQ9Y5Q3 323 aaPredicted RBP17.49■□□□□ 0.39
SNX6-202ENST00000396526 PPP3CAQ08209 521 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 MMGT1Q8N4V1 131 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 CALR3Q96L12 384 aaKnown RBP17.48■□□□□ 0.39
SNX6-202ENST00000396526 FNBP1Q96RU3 617 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 PACSIN1Q9BY11 444 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 TMEM8AQ9HCN3 771 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
SNX6-202ENST00000396526 ATG7O95352 703 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 STAT5BP51692 787 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 SPATA4Q8NEY3 305 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 RUBCNQ92622 972 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 SAAL1Q96ER3 474 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 NT5C1BQ96P26 610 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 PPME1Q9Y570 386 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 K7ERI5 159 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 DDX3XO00571 662 aaKnown RBP eCLIP17.48■□□□□ 0.398e-10■■■■■ 28.4
SNX6-202ENST00000396526 FTCDO95954 541 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 CXCR5P32302 372 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 EPHX2P34913 555 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 DLG4P78352 724 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 CBWD2Q8IUF1 395 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 GLYCTKQ8IVS8 523 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 PPM1KQ8N3J5 372 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 PARD3BQ8TEW8 1205 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 COG1Q8WTW3 980 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 PNKPQ96T60 521 aa17.48■□□□□ 0.39
SNX6-202ENST00000396526 GRID2IPA4D2P6 1211 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 TMCO5BA8MYB1 307 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 ANKRD63C9JTQ0 380 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 NOP56O00567 594 aaKnown RBP17.47■□□□□ 0.39
SNX6-202ENST00000396526 LRRN2O75325 713 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 STBD1O95210 358 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 VSNL1P62760 191 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 EPC2Q52LR7 807 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 PHLDB3Q6NSJ2 640 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 PEX26Q7Z412 305 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 PBKQ96KB5 322 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 TMEM117Q9H0C3 514 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 PDLIM7Q9NR12 457 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 LRRIQ4A6NIV6 560 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNX6-202ENST00000396526 NAMPTP43490 491 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 DNA2P51530 1060 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 MEI1Q5TIA1 1274 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 FBXL13Q8NEE6 735 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 SYT17Q9BSW7 474 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 ABCB6Q9NP58 842 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 XPNPEP1Q9NQW7 623 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 KCNH4Q9UQ05 1017 aa17.47■□□□□ 0.39
SNX6-202ENST00000396526 FOXN3O00409 490 aaPredicted RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 NCK2O43639 380 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 LDHAP00338 332 aaKnown RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 MAP2K1Q02750 393 aaPredicted RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 KIF22Q14807 665 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 GLE1Q53GS7 698 aaKnown RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 METTL7BQ6UX53 244 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 ZNF572Q7Z3I7 529 aaPredicted RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 AGPAT1Q99943 283 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 ARHGAP28Q9P2N2 729 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 AJAP1Q9UKB5 411 aaPredicted RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 PNMA3Q9UL41 463 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 DICER1Q9UPY3 1922 aaKnown RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 TBC1D8O95759 1140 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 TMEM253P0C7T8 217 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 UBA1P22314 1058 aaKnown RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 GALCP54803 685 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 BSNDQ8WZ55 320 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 GLG1Q92896 1179 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 NIFKQ9BYG3 293 aaKnown RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 MROH8Q9H579 483 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 SYNGAP1Q96PV0 1343 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 MYH10P35580 1976 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 GGPS1O95749 300 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 EDNRBP24530 442 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 SP2Q02086 613 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 GABPB1Q06547 395 aaPredicted RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 HSP90B2PQ58FF3 399 aa17.46■□□□□ 0.39
SNX6-202ENST00000396526 BEND6Q5SZJ8 279 aaPredicted RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 GTF3C2Q8WUA4 911 aaPredicted RBP17.46■□□□□ 0.39
SNX6-202ENST00000396526 FBXL18Q96ME1 805 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms