RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 FOXN3O00409 490 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 CTNNA1P35221 906 aaKnown RBP17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 HSD17B4P51659 736 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 GUCY1A3Q02108 690 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 ZNF844Q08AG5 666 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 BIRC3Q13489 604 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 TCEAL1Q15170 157 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 CLUL1Q15846 466 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 ARHGAP44Q17R89 818 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 B4GALNT4Q76KP1 1039 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 ARFGAP2Q8N6H7 521 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 PROCA1Q8NCQ7 364 aaPredicted RBP17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 AGPAT1Q99943 283 aa17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 LARSQ9P2J5 1176 aaKnown RBP17.28■□□□□ 0.36
CCHCR1-202ENST00000396263 CNTNAP1P78357 1384 aa17.27■□□□□ 0.36
CCHCR1-202ENST00000396263 RUFY4Q6ZNE9 571 aa17.27■□□□□ 0.36
CCHCR1-202ENST00000396263 TMC3Q7Z5M5 1100 aa17.27■□□□□ 0.36
CCHCR1-202ENST00000396263 SPATS2Q86XZ4 545 aaKnown RBP17.27■□□□□ 0.36
CCHCR1-202ENST00000396263 PALB2Q86YC2 1186 aa17.27■□□□□ 0.36
CCHCR1-202ENST00000396263 RHOT2Q8IXI1 618 aa17.27■□□□□ 0.36
CCHCR1-202ENST00000396263 PAGR1Q9BTK6 254 aa17.27■□□□□ 0.36
CCHCR1-202ENST00000396263 ZNF70Q9UC06 446 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-202ENST00000396263 P4HBP07237 508 aaKnown RBP17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 ITGB5P18084 799 aa17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 FLT3P36888 993 aa17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 CETN1Q12798 172 aa17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 PTGISQ16647 500 aa17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 NIPA1Q7RTP0 329 aa17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 CELF4Q9BZC1 486 aaKnown RBP17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 RAB17Q9H0T7 212 aa17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 COG5Q9UP83 839 aa17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 EMSYQ7Z589 1322 aa17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 RPTORQ8N122 1335 aa17.27■□□□□ 0.35
CCHCR1-202ENST00000396263 TBC1D12O60347 775 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 LRRN2O75325 713 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 SPDYE2Q495Y8 402 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 SPDYCQ5MJ68 293 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 MIER3Q7Z3K6 550 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 RDH13Q8NBN7 331 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 SPON1Q9HCB6 807 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 DBR1Q9UK59 544 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 PFASO15067 1338 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 MYO1FO00160 1098 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 VAMP7P51809 220 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 DLG4P78352 724 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 EPC2Q52LR7 807 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 AGBL2Q5U5Z8 902 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 C11orf63Q6NUN7 778 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 OR2W6PQ8NHA6 318 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 ATP8B4Q8TF62 1192 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 ACCSQ96QU6 501 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 KCNH7Q9NS40 1196 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 SEPT11Q9NVA2 429 aaKnown RBP17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 FBXO28Q9NVF7 368 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 NR2E1Q9Y466 385 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 SAMM50Q9Y512 469 aa17.26■□□□□ 0.35
CCHCR1-202ENST00000396263 GOLGA6L10A0A0M3HER8 536 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 MAPK13O15264 365 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 DHX15O43143 795 aaKnown RBP17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 MTMR14Q8NCE2 650 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 UBLCP1Q8WVY7 318 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 ZBED3Q96IU2 234 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 UBE2TQ9NPD8 197 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 DDX39AO00148 427 aaKnown RBP17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 ICAM1P05362 532 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 RARRES1P49788 294 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 PPP3CAQ08209 521 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 ZYXQ15942 572 aaKnown RBP17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 NAA35Q5VZE5 725 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 SLC20A1Q8WUM9 679 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 FAM212AQ96EL1 285 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 TXLNGYQ9BZA5 131 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 USP20Q9Y2K6 914 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 ZHX2Q9Y6X8 837 aa17.25■□□□□ 0.35
CCHCR1-202ENST00000396263 FAM187AA6NFU0 413 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 MIF4GDA9UHW6 222 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 PMM2O15305 246 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 EGFRP00533 1210 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 PLS3P13797 630 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 SNRPFP62306 86 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 PRPF4BQ13523 1007 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 DHX34Q14147 1143 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 TNIP1Q15025 636 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 NBPF9Q3BBW0 867 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 C1orf220Q5T0J3 134 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 DUPD1Q68J44 220 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 ARHGEF19Q8IW93 802 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 CDAN1Q8IWY9 1227 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 ALG3Q92685 438 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 ST6GALNAC4Q9H4F1 302 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 PCIF1Q9H4Z3 704 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 VEZTQ9HBM0 779 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 SLC12A6Q9UHW9 1150 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 ALG6Q9Y672 507 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 WNT10BO00744 389 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 PPFIA2O75334 1257 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 LYPLA2O95372 231 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 VCAM1P19320 739 aa17.24■□□□□ 0.35
CCHCR1-202ENST00000396263 CAP2P40123 477 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms