RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 KLHDC7AQ5VTJ3 777 aa12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 CYP4F22Q6NT55 531 aa12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 PDXDC1Q6P996 788 aa12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 RAD9BQ6WBX8 426 aa12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 REXO1L1PQ8IX06 675 aa12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 CCDC170Q8IYT3 715 aa12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 PPP1R13BQ96KQ4 1090 aa12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 TUT1Q9H6E5 874 aaKnown RBP12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 FAM207AQ9NSI2 230 aaPredicted RBP12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 ZNHIT6Q9NWK9 470 aaKnown RBP12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 SUCLA2Q9P2R7 463 aaPredicted RBP12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 PPP2R2CQ9Y2T4 447 aa12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 ADGRG1Q9Y653 693 aa12.97□□□□□ -0.33
GTF2A2-202ENST00000396060 MGAMO43451 1857 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 RRN3P2A6NIE6 340 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 SOWAHDA6NJG2 315 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 USP27XA6NNY8 438 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 HNRNPDLO14979 420 aaKnown RBP12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 ADCY6O43306 1168 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 CYP2B6P20813 491 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 NKX3-2P78367 333 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 LACTBP83111 547 aaPredicted RBP12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 DRP2Q13474 957 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 TFDP1Q14186 410 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 SNRNP35Q16560 246 aaKnown RBP12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 CCL14Q16627 93 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 C1orf220Q5T0J3 134 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 ZNF662Q6ZS27 426 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 GPD1LQ8N335 351 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 LSM14BQ9BX40 385 aaKnown RBP12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 FZD8Q9H461 694 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 PCIF1Q9H4Z3 704 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 SIX2Q9NPC8 291 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 AIPL1Q9NZN9 384 aa12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 EPN1Q9Y6I3 576 aaPredicted RBP12.96□□□□□ -0.33
GTF2A2-202ENST00000396060 LRRIQ4A6NIV6 560 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 DYNC1LI2O43237 492 aaPredicted RBP12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 EXTL3O43909 919 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 MSCO60682 206 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 LDHAP00338 332 aaKnown RBP12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 CCDC175P0C221 793 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 KLRC1P26715 233 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 CYP2C19P33261 490 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 PTENP60484 403 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 CLDN10P78369 228 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 DCAF17Q5H9S7 520 aaPredicted RBP12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 TCERG1LQ5VWI1 586 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 EFCAB12Q6NXP0 572 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 TOGARAM2Q6ZUX3 1019 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 USP37Q86T82 979 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 PARD3BQ8TEW8 1205 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 CAPNS2Q96L46 248 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 CHP1Q99653 195 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 CRACR2AQ9BSW2 395 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 SUGCTQ9HAC7 445 aa12.95□□□□□ -0.34
GTF2A2-202ENST00000396060 A0A0B4J269 797 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 HAS3O00219 553 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 LCA5LO95447 670 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 F2P00734 622 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 ADRB2P07550 413 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 UCHL3P15374 230 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 SLC9A1P19634 815 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 RFX1P22670 979 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 PSMC4P43686 418 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 LIG4P49917 911 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 APLP1P51693 650 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 CDC42EP1Q00587 391 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 FAM187BQ17R55 369 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 MTHFD1LQ6UB35 978 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 CACNA2D4Q7Z3S7 1137 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 CBWD2Q8IUF1 395 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 ZBTB8OSQ8IWT0 167 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 EHBP1Q8NDI1 1231 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 LMO3Q8TAP4 145 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 PLEKHO2Q8TD55 490 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 POMGNT1Q8WZA1 660 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 VTI1AQ96AJ9 217 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 MRPL4Q9BYD3 311 aaKnown RBP12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 COQ4Q9Y3A0 265 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 SSU72P8A0A1W2PR75 194 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 ZNF233A6NK53 670 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 EIF3CLB5ME19 914 aaKnown RBP12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 ACKR2O00590 384 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 KPNA6O60684 536 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 DUSP11O75319 330 aaKnown RBP12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 NDUFA10O95299 355 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 TMOD1P28289 359 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 MAP2K2P36507 400 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 CPT1AP50416 773 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 POLR2FP61218 127 aaKnown RBP12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 CYP24A1Q07973 514 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 CETN1Q12798 172 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 MTF1Q14872 753 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 PTPN14Q15678 1187 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 CBWD6Q4V339 395 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 CBWD3Q5JTY5 395 aa12.94□□□□□ -0.34
GTF2A2-202ENST00000396060 CBWD5Q5RIA9 395 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms