RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 SRGAP1Q7Z6B7 1085 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 USP37Q86T82 979 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 CNOT6LQ96LI5 555 aaKnown RBP14.99□□□□□ -0.01
VAPB-202ENST00000395802 MRPL4Q9BYD3 311 aaKnown RBP14.99□□□□□ -0.01
VAPB-202ENST00000395802 UNC93B1Q9H1C4 597 aa14.99□□□□□ -0.01
VAPB-202ENST00000395802 ADGRA3Q8IWK6 1321 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 HTTP42858 3142 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 ZMYM2Q9UBW7 1377 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 SCN10AQ9Y5Y9 1956 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 GOLGA6L6A8MZA4 724 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 INO80B-WBP1J3KQ70 363 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 PIGRP01833 764 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 HSPA1AP0DMV8 641 aaKnown RBP14.98□□□□□ -0.01
VAPB-202ENST00000395802 HSPA1BP0DMV9 641 aaKnown RBP14.98□□□□□ -0.01
VAPB-202ENST00000395802 CCL5P13501 91 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 GARTP22102 1010 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 PSMC2P35998 433 aaKnown RBP14.98□□□□□ -0.01
VAPB-202ENST00000395802 MTIF2P46199 727 aaKnown RBP14.98□□□□□ -0.01
VAPB-202ENST00000395802 LBX1P52954 281 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 MARSP56192 900 aaKnown RBP14.98□□□□□ -0.01
VAPB-202ENST00000395802 ITGA7Q13683 1181 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 FRMD5Q7Z6J6 570 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 GCOM2Q9BZD3 368 aaPredicted RBP14.98□□□□□ -0.01
VAPB-202ENST00000395802 KIAA1586Q9HCI6 787 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 STARD7Q9NQZ5 370 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 NOD1Q9Y239 953 aa14.98□□□□□ -0.01
VAPB-202ENST00000395802 ACKR2O00590 384 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 TREHO43280 583 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 EXOC3O60645 756 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 CDC25BP30305 580 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 GPC3P51654 580 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 NLRP11P59045 1033 aaKnown RBP14.97□□□□□ -0.01
VAPB-202ENST00000395802 HSP90AA4PQ58FG1 418 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 KSR1Q8IVT5 923 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 XXYLT1Q8NBI6 393 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 DEFB118Q96PH6 123 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 TUBGCP2Q9BSJ2 902 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 FAM49AQ9H0Q0 323 aaPredicted RBP14.97□□□□□ -0.01
VAPB-202ENST00000395802 IFNKQ9P0W0 207 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 PHF24Q9UPV7 400 aa14.97□□□□□ -0.01
VAPB-202ENST00000395802 A0A0U1RQG5 324 aaPredicted RBP14.96□□□□□ -0.01
VAPB-202ENST00000395802 N4BP3O15049 544 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 MAPK13O15264 365 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 LDHAP00338 332 aaKnown RBP14.96□□□□□ -0.01
VAPB-202ENST00000395802 VTNP04004 478 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 PRKCBP05771 671 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 KRT31Q15323 416 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 FAM187BQ17R55 369 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 CEP135Q66GS9 1140 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 APBB1IPQ7Z5R6 666 aaPredicted RBP14.96□□□□□ -0.01
VAPB-202ENST00000395802 RPAINQ86UA6 219 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 POMGNT1Q8WZA1 660 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 FZD8Q9H461 694 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 IFT122Q9HBG6 1241 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 DMAC2Q9NW81 257 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 ARMCX3Q9UH62 379 aaPredicted RBP14.96□□□□□ -0.01
VAPB-202ENST00000395802 OGDHLQ9ULD0 1010 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 A0A087WZ62 844 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 CLIC2O15247 247 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 TOM1L1O75674 476 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 ERLIN2O94905 339 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 PRPF4BQ13523 1007 aaKnown RBP14.96□□□□□ -0.01
VAPB-202ENST00000395802 MAN2A1Q16706 1144 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 TMEM132AQ24JP5 1023 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 IRF2BP1Q8IU81 584 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 DNAJB3Q8WWF6 145 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 ARMC5Q96C12 935 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 FDXACB1Q9BRP7 624 aaPredicted RBP14.96□□□□□ -0.01
VAPB-202ENST00000395802 NOC4LQ9BVI4 516 aaKnown RBP14.96□□□□□ -0.01
VAPB-202ENST00000395802 XPO4Q9C0E2 1151 aaKnown RBP14.96□□□□□ -0.01
VAPB-202ENST00000395802 CCDC113Q9H0I3 377 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 HSPBP1Q9NZL4 362 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 STYXL1Q9Y6J8 313 aa14.96□□□□□ -0.01
VAPB-202ENST00000395802 EVPLQ92817 2033 aa14.96□□□□□ -0.02
VAPB-202ENST00000395802 A0A1B0GTH6 734 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 A0A1W2PQ45 241 aaPredicted RBP14.95□□□□□ -0.02
VAPB-202ENST00000395802 A0A1W2PQY0 241 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 CLDN3O15551 220 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 CAND2O75155 1236 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 KRT13P13646 458 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 SFPQP23246 707 aaKnown RBP eCLIP14.95□□□□□ -0.022e-8■□□□□ 10.1
VAPB-202ENST00000395802 MBTD1Q05BQ5 628 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 PTGISQ16647 500 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 FKBP15Q5T1M5 1219 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 INTS8Q75QN2 995 aaKnown RBP14.95□□□□□ -0.02
VAPB-202ENST00000395802 SERINC5Q86VE9 423 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 DRC7Q8IY82 874 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 FAM186BQ8IYM0 893 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 ZBTB10Q96DT7 871 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 EEF2KMTQ96G04 330 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 ZNF333Q96JL9 665 aa14.95□□□□□ -0.02
VAPB-202ENST00000395802 PES1O00541 588 aaKnown RBP14.94□□□□□ -0.02
VAPB-202ENST00000395802 GJB1P08034 283 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 MATR3P43243 847 aaKnown RBP eCLIP14.94□□□□□ -0.026e-7■■■■□ 22.1
VAPB-202ENST00000395802 CYP2J2P51589 502 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 COPB1P53618 953 aaKnown RBP14.94□□□□□ -0.02
VAPB-202ENST00000395802 CRYBB1P53674 252 aaPredicted RBP14.94□□□□□ -0.02
VAPB-202ENST00000395802 ENPEPQ07075 957 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 PTK7Q13308 1070 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 MTFR1Q15390 333 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms