RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ALCAMQ13740 583 aa16.54■□□□□ 0.24
SCAF11-204ENST00000395454 MTERF2Q49AM1 385 aa16.54■□□□□ 0.24
SCAF11-204ENST00000395454 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
SCAF11-204ENST00000395454 MYCT1Q8N699 235 aa16.54■□□□□ 0.24
SCAF11-204ENST00000395454 CEP170P1Q96L14 293 aa16.54■□□□□ 0.24
SCAF11-204ENST00000395454 ST6GALNAC4Q9H4F1 302 aa16.54■□□□□ 0.24
SCAF11-204ENST00000395454 STARD7Q9NQZ5 370 aa16.54■□□□□ 0.24
SCAF11-204ENST00000395454 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
SCAF11-204ENST00000395454 HIP1RO75146 1068 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 RPL13P26373 211 aaKnown RBP16.53■□□□□ 0.24
SCAF11-204ENST00000395454 IGBP1P78318 339 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 XKR9Q5GH70 373 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 ZNF662Q6ZS27 426 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 C7orf31Q8N865 590 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 DESI2Q9BSY9 194 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 PLAGL2Q9UPG8 496 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 PHF24Q9UPV7 400 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 HAS3O00219 553 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 FANCGO15287 622 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 NR3C1P04150 777 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 SMIM10L2AP0DMW4 78 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 SMIM10L2BP0DMW5 78 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 INSRRP14616 1297 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 KCNMA1Q12791 1236 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 PPFIA1Q13136 1202 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 MYBPC2Q14324 1141 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 NBPF20Q3BBV1 942 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 FAM47CQ5HY64 1035 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 FAM178BQ8IXR5 827 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 BORCS6Q96GS4 357 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 MKNK1Q9BUB5 465 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 METTL14Q9HCE5 456 aaKnown RBP16.53■□□□□ 0.24
SCAF11-204ENST00000395454 CYP26B1Q9NR63 512 aa16.53■□□□□ 0.24
SCAF11-204ENST00000395454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCAF11-204ENST00000395454 SFI1A8K8P3 1242 aa16.52■□□□□ 0.23
SCAF11-204ENST00000395454 NMT1P30419 496 aaKnown RBP16.52■□□□□ 0.23
SCAF11-204ENST00000395454 KCNA1Q09470 495 aa16.52■□□□□ 0.23
SCAF11-204ENST00000395454 ITGA7Q13683 1181 aa16.52■□□□□ 0.23
SCAF11-204ENST00000395454 ODR4Q5SWX8 454 aa16.52■□□□□ 0.23
SCAF11-204ENST00000395454 SLC9A9Q8IVB4 645 aa16.52■□□□□ 0.23
SCAF11-204ENST00000395454 GOLGA5Q8TBA6 731 aa16.52■□□□□ 0.23
SCAF11-204ENST00000395454 DIS3LQ8TF46 1054 aaKnown RBP16.52■□□□□ 0.23
SCAF11-204ENST00000395454 TRAPPC12Q8WVT3 735 aa16.52■□□□□ 0.23
SCAF11-204ENST00000395454 BAP1Q92560 729 aa16.52■□□□□ 0.23
SCAF11-204ENST00000395454 NIFKQ9BYG3 293 aaKnown RBP16.52■□□□□ 0.23
SCAF11-204ENST00000395454 SENP6Q9GZR1 1112 aaPredicted RBP16.52■□□□□ 0.23
SCAF11-204ENST00000395454 DMAC2Q9NW81 257 aa16.52■□□□□ 0.23
SCAF11-204ENST00000395454 PCDHB13Q9Y5F0 798 aa16.52■□□□□ 0.23
SCAF11-204ENST00000395454 EPHB6O15197 1021 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 NDUFA10O95299 355 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 MNX1P50219 401 aaPredicted RBP16.51■□□□□ 0.23
SCAF11-204ENST00000395454 GRIK4Q16099 956 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 SYT10Q6XYQ8 523 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 CCDC170Q8IYT3 715 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 ANKLE1Q8NAG6 615 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 ZNF397Q8NF99 534 aaPredicted RBP16.51■□□□□ 0.23
SCAF11-204ENST00000395454 CHP1Q99653 195 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 SETD4Q9NVD3 440 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 LARSQ9P2J5 1176 aaKnown RBP16.51■□□□□ 0.23
SCAF11-204ENST00000395454 HDAC6Q9UBN7 1215 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 ARMCX3Q9UH62 379 aaPredicted RBP16.51■□□□□ 0.23
SCAF11-204ENST00000395454 EPN1Q9Y6I3 576 aaPredicted RBP16.51■□□□□ 0.23
SCAF11-204ENST00000395454 NRCAMQ92823 1304 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 ZBTB42B2RXF5 422 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 AKAP3O75969 853 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 PLS3P13797 630 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 TSR1Q2NL82 804 aaKnown RBP16.51■□□□□ 0.23
SCAF11-204ENST00000395454 LMBR1Q8WVP7 490 aa16.51■□□□□ 0.23
SCAF11-204ENST00000395454 SYN2Q92777 582 aaPredicted RBP16.51■□□□□ 0.23
SCAF11-204ENST00000395454 REXO2Q9Y3B8 237 aaKnown RBP16.51■□□□□ 0.23
SCAF11-204ENST00000395454 GRIN2DO15399 1336 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 USO1O60763 962 aaKnown RBP16.5■□□□□ 0.23
SCAF11-204ENST00000395454 NOL4O94818 638 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 EN2P19622 333 aaPredicted RBP16.5■□□□□ 0.23
SCAF11-204ENST00000395454 POLGP54098 1239 aaPredicted RBP16.5■□□□□ 0.23
SCAF11-204ENST00000395454 MCCD1P59942 119 aaPredicted RBP16.5■□□□□ 0.23
SCAF11-204ENST00000395454 ZNF484Q5JVG2 852 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 DPY19L2P1Q6NXN4 242 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 NFRKBQ6P4R8 1299 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 C12orf56Q8IXR9 622 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 SLC17A8Q8NDX2 589 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 SLC7A3Q8WY07 619 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 ZBTB10Q96DT7 871 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 ABHD8Q96I13 439 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 DRC1Q96MC2 740 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 CEP72Q9P209 647 aa16.5■□□□□ 0.23
SCAF11-204ENST00000395454 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
SCAF11-204ENST00000395454 TRIP12Q14669 1992 aaPredicted RBP16.5■□□□□ 0.23
SCAF11-204ENST00000395454 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 GTPBP10A4D1E9 387 aaKnown RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 SNRPFP62306 86 aaKnown RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 TARBP2Q15633 366 aaKnown RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 ZC2HC1CQ53FD0 456 aaPredicted RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 MAEAQ7L5Y9 396 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 ZNF592Q92610 1267 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 KCNN1Q92952 543 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 PAWRQ96IZ0 340 aaKnown RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 GBP3Q9H0R5 595 aa16.49■□□□□ 0.23
SCAF11-204ENST00000395454 NUCKS1Q9H1E3 243 aaKnown RBP16.49■□□□□ 0.23
SCAF11-204ENST00000395454 AGPAT3Q9NRZ7 376 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms