RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 ZNF658Q5TYW1 1059 aaPredicted RBP12.65□□□□□ -0.38
RTN1-203ENST00000395090 MIS18BP1Q6P0N0 1132 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 FIGNL1Q6PIW4 674 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 C1orf186Q6ZWK4 172 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 UNC13DQ70J99 1090 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 FBXO16Q8IX29 292 aaPredicted RBP12.65□□□□□ -0.38
RTN1-203ENST00000395090 RNF214Q8ND24 703 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 SOCS4Q8WXH5 440 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 NUCKS1Q9H1E3 243 aaKnown RBP12.65□□□□□ -0.38
RTN1-203ENST00000395090 ABHD16BQ9H3Z7 469 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 PDGFCQ9NRA1 345 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 KCND2Q9NZV8 630 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 DOCK3Q8IZD9 2030 aa12.65□□□□□ -0.38
RTN1-203ENST00000395090 DKC1O60832 514 aaKnown RBP eCLIP12.64□□□□□ -0.39
RTN1-203ENST00000395090 GGPS1O95749 300 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 SUPT20HL2P0C7V6 817 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 TXNP10599 105 aaKnown RBP12.64□□□□□ -0.39
RTN1-203ENST00000395090 XRCC5P13010 732 aaKnown RBP12.64□□□□□ -0.39
RTN1-203ENST00000395090 ERCC5P28715 1186 aaPredicted RBP12.64□□□□□ -0.39
RTN1-203ENST00000395090 ASIC1P78348 528 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 GIT2Q14161 759 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 UGCGQ16739 394 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 OLFML2BQ68BL8 750 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 RINT1Q6NUQ1 792 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 GPBP1Q86WP2 473 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 DHX40Q8IX18 779 aaKnown RBP12.64□□□□□ -0.39
RTN1-203ENST00000395090 GJD3Q8N144 294 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 SEPT1Q8WYJ6 367 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 ZCCHC2Q9C0B9 1178 aaKnown RBP12.64□□□□□ -0.39
RTN1-203ENST00000395090 ANKEF1Q9NU02 776 aa12.64□□□□□ -0.39
RTN1-203ENST00000395090 MCM3APO60318 1980 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 TNPO2O14787 897 aaKnown RBP12.63□□□□□ -0.39
RTN1-203ENST00000395090 IKBKBO14920 756 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 ZNF862O60290 1169 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 SSBP05455 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
RTN1-203ENST00000395090 EPB42P16452 691 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 YWHABP31946 246 aaKnown RBP12.63□□□□□ -0.39
RTN1-203ENST00000395090 RGS2P41220 211 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 FCGRTP55899 365 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 PSMD2Q13200 908 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 ACVR2BQ13705 512 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 COBLL1Q53SF7 1204 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 IQSEC1Q6DN90 963 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 SWSAP1Q6NVH7 229 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 NPAS4Q8IUM7 802 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 ATP6V0A1Q93050 837 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 CCDC47Q96A33 483 aaKnown RBP12.63□□□□□ -0.39
RTN1-203ENST00000395090 MLXIPQ9HAP2 919 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 RNF186Q9NXI6 227 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 GABBR1Q9UBS5 961 aa12.63□□□□□ -0.39
RTN1-203ENST00000395090 TBC1D8O95759 1140 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 RPLP1P05386 114 aaKnown RBP12.62□□□□□ -0.39
RTN1-203ENST00000395090 THBS1P07996 1170 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 PSMC4P43686 418 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 RARRES1P49788 294 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 LAMC2Q13753 1193 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 TMEM63BQ5T3F8 832 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 LUZP1Q86V48 1076 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 CCDC60Q8IWA6 550 aaPredicted RBP12.62□□□□□ -0.39
RTN1-203ENST00000395090 TTC16Q8NEE8 873 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 DMRTB1Q96MA1 342 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 MED15Q96RN5 788 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 FAM129BQ96TA1 746 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 PCYT2Q99447 389 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 GPR20Q99678 358 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 RUSC1Q9BVN2 902 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 FLRT1Q9NZU1 646 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 NPHP3-ACAD11A0A0J9YXS1 232 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 GUCY2CP25092 1073 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 SP3Q02447 781 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 ARHGAP1Q07960 439 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 STK4Q13043 487 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 NCAPHQ15003 741 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 DBN1Q16643 649 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 HSDL1Q3SXM5 330 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 DUSP28Q4G0W2 176 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 ANO5Q75V66 913 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 OTUD6AQ7L8S5 288 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 CCDC65Q8IXS2 484 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 DHX37Q8IY37 1157 aaKnown RBP12.62□□□□□ -0.39
RTN1-203ENST00000395090 ADSSL1Q8N142 457 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 ENOX1Q8TC92 643 aaKnown RBP12.62□□□□□ -0.39
RTN1-203ENST00000395090 APBA2Q99767 749 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 BRD7Q9NPI1 651 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 ZNF302Q9NR11 478 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 EXOC1Q9NV70 894 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 PANK4Q9NVE7 773 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 CUEDC1Q9NWM3 386 aaPredicted RBP12.62□□□□□ -0.39
RTN1-203ENST00000395090 PCDHA2Q9Y5H9 948 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 IGSF9BQ9UPX0 1349 aa12.62□□□□□ -0.39
RTN1-203ENST00000395090 SMTNL1A8MU46 457 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 NKRFO15226 690 aaKnown RBP eCLIP12.61□□□□□ -0.39
RTN1-203ENST00000395090 ATXN7O15265 892 aaPredicted RBP12.61□□□□□ -0.39
RTN1-203ENST00000395090 SORBS3O60504 671 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 TRPA1O75762 1119 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 CYP2B6P20813 491 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 ADCYAP1R1P41586 468 aa12.61□□□□□ -0.39
RTN1-203ENST00000395090 PRCPP42785 496 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms