RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 TBCKQ8TEA7 893 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 SCFD1Q8WVM8 642 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 NCSTNQ92542 709 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 GATA6Q92908 595 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 DTNBP1Q96EV8 351 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 NUDCD1Q96RS6 583 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 NUDT12Q9BQG2 462 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 LZTS2Q9BRK4 669 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 TIPINQ9BVW5 301 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 SPZ1Q9BXG8 430 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 TBC1D10AQ9BXI6 508 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 MYLK2Q9H1R3 596 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 KANSL2Q9H9L4 492 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 OSGEPQ9NPF4 335 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 PCMTD2Q9NV79 361 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 DLGAP2Q9P1A6 1054 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 ARPP21Q9UBL0 812 aaPredicted RBP6.79□□□□□ -1.32
NXF3-201ENST00000395065 TRAF3IP3Q9Y228 551 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 CHKBQ9Y259 395 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 LRCH1Q9Y2L9 728 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 RTCBQ9Y3I0 505 aaKnown RBP6.79□□□□□ -1.32
NXF3-201ENST00000395065 STARD13Q9Y3M8 1113 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 ACTL7BQ9Y614 415 aa6.79□□□□□ -1.32
NXF3-201ENST00000395065 ESYT2A0FGR8 921 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 GTPBP10A4D1E9 387 aaKnown RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 SMCO2A6NFE2 343 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 CETN3O15182 167 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 NTSR2O95665 410 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 TTLL1O95922 423 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 PDHA1P08559 390 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 FGFR4P22455 802 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 SMARCA1P28370 1054 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 COPB2P35606 906 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 RFC5P40937 340 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 PSMC4P43686 418 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 CHRNDQ07001 517 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 MOGSQ13724 837 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 RRP1BQ14684 758 aaKnown RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 EPHA7Q15375 998 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 EXOC3L4Q17RC7 722 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 PABPC1LQ4VXU2 614 aaKnown RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 TTC27Q6P3X3 843 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 RGS9BPQ6ZS82 235 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 ARHGEF18Q6ZSZ5 1173 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 SLC17A8Q8NDX2 589 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 PHC3Q8NDX5 983 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 SUPT20HQ8NEM7 779 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 LNX1Q8TBB1 728 aaPredicted RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 ALG3Q92685 438 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 C18orf8Q96DM3 657 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 CDK5RAP3Q96JB5 506 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 GJD4Q96KN9 370 aaPredicted RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 NLRP3Q96P20 1036 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 TGS1Q96RS0 853 aaKnown RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 FGFBP2Q9BYJ0 223 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 RAB34Q9BZG1 259 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 TRIM4Q9C037 500 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 FAM192AQ9GZU8 254 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 C6orf50Q9HD87 102 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 DMAP1Q9NPF5 467 aaPredicted RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 AAASQ9NRG9 546 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 LMCD1Q9NZU5 365 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 ABCF2Q9UG63 623 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 ARMCX3Q9UH62 379 aaPredicted RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 LGALS13Q9UHV8 139 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 HDAC9Q9UKV0 1011 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 NIP7Q9Y221 180 aaKnown RBP eCLIP6.78□□□□□ -1.32
NXF3-201ENST00000395065 SYNGAP1Q96PV0 1343 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 ROBO3Q96MS0 1386 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 LOC102724428A0A0B4J2F2 783 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 WTIPA6NIX2 430 aaPredicted RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 EIF4E1BA6NMX2 242 aaKnown RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 MIF4GDA9UHW6 222 aaKnown RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 GH1P01241 217 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 PYGLP06737 847 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 IGHMBP2P38935 993 aaKnown RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 VHLP40337 213 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 EPS15P42566 896 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 RASSF2P50749 326 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 SIK1P57059 783 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 GIT2Q14161 759 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 DDB1Q16531 1140 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 CALCRLQ16602 461 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 ECM1Q16610 540 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 LONRF1Q17RB8 773 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 TMEM266Q2M3C6 531 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 SOGA3Q5TF21 947 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 KRT79Q5XKE5 535 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 RHBDF2Q6PJF5 856 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 DEFB132Q7Z7B7 95 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 SNX29Q8TEQ0 813 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 U2AF1L4Q8WU68 220 aaKnown RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 PTPRN2Q92932 1015 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 SLCO2A1Q92959 643 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 PITPNM3Q9BZ71 974 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 CCDC113Q9H0I3 377 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 TAOK3Q9H2K8 898 aa6.78□□□□□ -1.32
NXF3-201ENST00000395065 CDC42EP4Q9H3Q1 356 aaKnown RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 DENND2DQ9H6A0 471 aaPredicted RBP6.78□□□□□ -1.32
NXF3-201ENST00000395065 EMILIN3Q9NT22 766 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms