RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TMEM39BQ9GZU3 492 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 SEL1LQ9UBV2 794 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 FAM13AO94988 1023 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 CALRP27797 417 aaKnown RBP16.8■□□□□ 0.28
PTBP1-204ENST00000394601 MDH1P40925 334 aaKnown RBP16.8■□□□□ 0.28
PTBP1-204ENST00000394601 SMTNP53814 917 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 PPATQ06203 517 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 C1orf220Q5T0J3 134 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 AP1ARQ63HQ0 302 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 ADAT2Q7Z6V5 191 aaKnown RBP16.8■□□□□ 0.28
PTBP1-204ENST00000394601 LDHDQ86WU2 507 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 PALB2Q86YC2 1186 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 IL31RAQ8NI17 732 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 CLEC4DQ8WXI8 215 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 LXNQ9BS40 222 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 ZNF577Q9BSK1 485 aa16.8■□□□□ 0.28
PTBP1-204ENST00000394601 NCANO14594 1321 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 C21orf2O43822 256 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 GAS7O60861 476 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 LRRN2O75325 713 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 GFPT2O94808 682 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 SOX5P35711 763 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 NPEPPSP55786 919 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 DCAF12L1Q5VU92 463 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 TCERG1LQ5VWI1 586 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 PHLDB3Q6NSJ2 640 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 IFT20Q8IY31 132 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 NACC1Q96RE7 527 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 KCNK3O14649 394 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 CAP2P40123 477 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 POU5F1Q01860 360 aaKnown RBP16.79■□□□□ 0.28
PTBP1-204ENST00000394601 RPS6KA1Q15418 735 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 CACNA2D3Q8IZS8 1091 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 MXRA8Q9BRK3 442 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 FLOT1O75955 427 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 CTNNA1P35221 906 aaKnown RBP16.79■□□□□ 0.28
PTBP1-204ENST00000394601 GALCP54803 685 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 DLG4P78352 724 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 IFFO1Q0D2I5 559 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 OSGEPQ9NPF4 335 aa16.79■□□□□ 0.28
PTBP1-204ENST00000394601 SUCLA2Q9P2R7 463 aaPredicted RBP16.79■□□□□ 0.28
PTBP1-204ENST00000394601 TISP43B9A030 160 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 IPO5O00410 1097 aaKnown RBP16.78■□□□□ 0.28
PTBP1-204ENST00000394601 DIAPH2O60879 1101 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 TRIM49P0CI25 452 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 TRIM49CP0CI26 452 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 MAP2K1Q02750 393 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-204ENST00000394601 ITGB3BPQ13352 177 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-204ENST00000394601 DRAP1Q14919 205 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-204ENST00000394601 EMC10Q5UCC4 262 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 CD302Q8IX05 232 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 ZSWIM2Q8NEG5 633 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 HVCN1Q96D96 273 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 PBKQ96KB5 322 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 AGBL1Q96MI9 1066 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 NEUROG2Q9H2A3 272 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 TAS2R14Q9NYV8 317 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 HIP1RO75146 1068 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 KIF2BQ8N4N8 673 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 SPDYE1Q8NFV5 336 aaPredicted RBP16.78■□□□□ 0.28
PTBP1-204ENST00000394601 SEC14L1Q92503 715 aa16.78■□□□□ 0.28
PTBP1-204ENST00000394601 SPATS2LQ9NUQ6 558 aaKnown RBP16.78■□□□□ 0.28
PTBP1-204ENST00000394601 MRPL11Q9Y3B7 192 aaKnown RBP16.78■□□□□ 0.28
PTBP1-204ENST00000394601 DCDC2CA8MYV0 355 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 DDX3YO15523 660 aaKnown RBP16.77■□□□□ 0.28
PTBP1-204ENST00000394601 RAD17O75943 681 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 BCRP11274 1271 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 FERP16591 822 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 KCNA3P22001 575 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 GRIPAP1Q4V328 841 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 FAM178BQ8IXR5 827 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 PLEKHO2Q8TD55 490 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 CHURC1Q8WUH1 139 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 PRCCQ92733 491 aaPredicted RBP16.77■□□□□ 0.28
PTBP1-204ENST00000394601 RIT2Q99578 217 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 AP1M1Q9BXS5 423 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 DNAJC12Q9UKB3 198 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 H0YGN5 161 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 ITGA4P13612 1032 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 MIGA2Q7L4E1 593 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 EIF1ADQ8N9N8 165 aaKnown RBP16.77■□□□□ 0.28
PTBP1-204ENST00000394601 MTMR14Q8NCE2 650 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 WDR11Q9BZH6 1224 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 ISCUQ9H1K1 167 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 NFS1Q9Y697 457 aa16.77■□□□□ 0.28
PTBP1-204ENST00000394601 MYZAPP0CAP1 466 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 STAT1P42224 750 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 SCTRP47872 440 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 MRPS9P82933 396 aaKnown RBP16.77■□□□□ 0.27
PTBP1-204ENST00000394601 SKOR1P84550 965 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 ODR4Q5SWX8 454 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 FKBP1CQ5VVH2 108 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 MGARPQ8TDB4 240 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 ARHGEF26Q96DR7 871 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 INTS2Q9H0H0 1204 aaKnown RBP16.77■□□□□ 0.27
PTBP1-204ENST00000394601 DPH5Q9H2P9 285 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 KCNH7Q9NS40 1196 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 APEX2Q9UBZ4 518 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms