RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 CCDC137Q6PK04 289 aaKnown RBP11.36□□□□□ -0.59
ACTN1-203ENST00000394419 INTS8Q75QN2 995 aaKnown RBP11.36□□□□□ -0.59
ACTN1-203ENST00000394419 PSMD1Q99460 953 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 KIAA1551Q9HCM1 1747 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 NAV1Q8NEY1 1877 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 FRMD3A2A2Y4 597 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 HNRNPDLO14979 420 aaKnown RBP11.36□□□□□ -0.59
ACTN1-203ENST00000394419 PMS2P54278 862 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 MTMR1Q13613 665 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 SLC29A2Q14542 456 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 JAMLQ86YT9 394 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 ALG3Q92685 438 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 CALR3Q96L12 384 aaKnown RBP11.36□□□□□ -0.59
ACTN1-203ENST00000394419 NUP85Q9BW27 656 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 ERVK-5Q9HDB9 667 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 HSPBP1Q9NZL4 362 aa11.36□□□□□ -0.59
ACTN1-203ENST00000394419 DBR1Q9UK59 544 aaKnown RBP11.36□□□□□ -0.59
ACTN1-203ENST00000394419 MYH7BA7E2Y1 1941 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 UTRNP46939 3433 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 OPLAHO14841 1288 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 SHOX2O60902 331 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-203ENST00000394419 PRKCIP41743 596 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 PPP3CAQ08209 521 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 TMEM132AQ24JP5 1023 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 EPM2AIP1Q7L775 607 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-203ENST00000394419 ZNF572Q7Z3I7 529 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-203ENST00000394419 CBWD2Q8IUF1 395 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 PASD1Q8IV76 773 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 TAB3Q8N5C8 712 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-203ENST00000394419 PIK3R5Q8WYR1 880 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 ERP44Q9BS26 406 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 TOPORSQ9NS56 1045 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-203ENST00000394419 PSMD10O75832 226 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 PDE6CP51160 858 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 PRKG1Q13976 671 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 UAP1Q16222 522 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-203ENST00000394419 ARHGEF16Q5VV41 709 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 ICE2Q659A1 982 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 SLC47A2Q86VL8 602 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 CPNE8Q86YQ8 564 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 DHX38Q92620 1227 aaKnown RBP11.35□□□□□ -0.59
ACTN1-203ENST00000394419 FNBP1Q96RU3 617 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 IDI2Q9BXS1 227 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 INTS9Q9NV88 658 aaKnown RBP11.35□□□□□ -0.59
ACTN1-203ENST00000394419 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
ACTN1-203ENST00000394419 EIF3DO15371 548 aaKnown RBP eCLIP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 SHBGP04278 402 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 P4HBP07237 508 aaKnown RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 MMEP08473 750 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 QARSP47897 775 aaKnown RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 SKOR1P84550 965 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 PLCB3Q01970 1234 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 PNMA8AQ86V59 439 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 RHOT2Q8IXI1 618 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 GMCL1P1Q8NEA9 526 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 ZNF564Q8TBZ8 553 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 CEP170P1Q96L14 293 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 TCHPQ9BT92 498 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 TMEM206Q9H813 350 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 SEL1LQ9UBV2 794 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 ZHX2Q9Y6X8 837 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 CLDN3O15551 220 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 NF2P35240 595 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 ITGB3BPQ13352 177 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 ZKSCAN8Q15776 578 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 SGO2Q562F6 1265 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 KAZNQ674X7 775 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 TATDN1Q6P1N9 297 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 TMC3Q7Z5M5 1100 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 IL31RAQ8NI17 732 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 ELAC2Q9BQ52 826 aaKnown RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 KMT5AQ9NQR1 393 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 SAMD15Q9P1V8 674 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 ANAPC7Q9UJX3 599 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 IGLV3-22A0A075B6J6 115 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 DENND3A2RUS2 1198 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 FAM107AO95990 144 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 MAPK4P31152 587 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 YWHABP31946 246 aaKnown RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 CIITAP33076 1130 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 ADCY8P40145 1251 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 MFAP3P55082 362 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 HP1BP3Q5SSJ5 553 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 ANKS4BQ8N8V4 417 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 NT5C1BQ96P26 610 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 RMDN3Q96TC7 470 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 JPH2Q9BR39 696 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 PLVAPQ9BX97 442 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 SEMA4AQ9H3S1 761 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 CNOT8Q9UFF9 292 aaKnown RBP11.34□□□□□ -0.59
ACTN1-203ENST00000394419 COG5Q9UP83 839 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 LAMB1P07942 1786 aa11.34□□□□□ -0.59
ACTN1-203ENST00000394419 ITGB5P18084 799 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 TNFRSF8P28908 595 aa11.33□□□□□ -0.6
ACTN1-203ENST00000394419 DMP1Q13316 513 aaPredicted RBP11.33□□□□□ -0.6
ACTN1-203ENST00000394419 FAM133BQ5BKY9 247 aaKnown RBP11.33□□□□□ -0.6
ACTN1-203ENST00000394419 MMS22LQ6ZRQ5 1243 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms