RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 TBX3O15119 743 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 PSMD10O75832 226 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 RHOBTB3O94955 611 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 ADH1BP00325 375 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 ZNF18P17022 549 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 CD53P19397 219 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 LMNB2Q03252 620 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 GOLGA8FQ08AF8 430 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 GOLGA8DPQ0D2H9 430 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 PGM5Q15124 567 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 HS1BP3Q53T59 392 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 ARHGEF16Q5VV41 709 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 SPATA1Q5VX52 437 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 HAUS3Q68CZ6 603 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 OTOP1Q7RTM1 612 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 ERO1BQ86YB8 467 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 EGFL6Q8IUX8 553 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 FAM43AQ8N2R8 423 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 GIMAP8Q8ND71 665 aaPredicted RBP6.48□□□□□ -1.37
CASC3-202ENST00000394114 ST13P5Q8NFI4 369 aaPredicted RBP6.48□□□□□ -1.37
CASC3-202ENST00000394114 ERMNQ8TAM6 284 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 CACTINQ8WUQ7 758 aaKnown RBP6.48□□□□□ -1.37
CASC3-202ENST00000394114 SLC5A5Q92911 643 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 OPTNQ96CV9 577 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 DYDC2Q96IM9 177 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 MXRA8Q9BRK3 442 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 R3HDMLQ9H3Y0 253 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 MAGEF1Q9HAY2 307 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 HOXC10Q9NYD6 342 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 ZIM2Q9NZV7 527 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 PYCARDQ9ULZ3 195 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 KDM3AQ9Y4C1 1321 aa6.48□□□□□ -1.37
CASC3-202ENST00000394114 MKI67P46013 3256 aaKnown RBP6.48□□□□□ -1.37
CASC3-202ENST00000394114 SP4Q02446 784 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 CAMK2GQ13555 558 aaPredicted RBP6.47□□□□□ -1.37
CASC3-202ENST00000394114 MTMR1Q13613 665 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 CT47A1Q5JQC4 288 aaPredicted RBP6.47□□□□□ -1.37
CASC3-202ENST00000394114 SNAP47Q5SQN1 464 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 PERM1Q5SV97 790 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.47□□□□□ -1.37
CASC3-202ENST00000394114 PCGF5Q86SE9 256 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 CHPFQ8IZ52 775 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 ADSSL1Q8N142 457 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 KIAA0895Q8NCT3 520 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 ZSWIM2Q8NEG5 633 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 PPM1EQ8WY54 764 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 CCDC47Q96A33 483 aaKnown RBP6.47□□□□□ -1.37
CASC3-202ENST00000394114 TRIM47Q96LD4 638 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 SH2D3AQ9BRG2 576 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 FGFBP2Q9BYJ0 223 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 NT5C3AQ9H0P0 336 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 BHMT2Q9H2M3 363 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 UNC45AQ9H3U1 944 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 BCAS3Q9H6U6 928 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 RRAGCQ9HB90 399 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 A1CFQ9NQ94 594 aaKnown RBP6.47□□□□□ -1.37
CASC3-202ENST00000394114 PXMP2Q9NR77 195 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 INTS13Q9NVM9 706 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 BTBD7Q9P203 1132 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 SAMM50Q9Y512 469 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 AKAP10O43572 662 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 ATP9AO75110 1047 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 RPA1P27694 616 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 LIG3P49916 1009 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 GUCY2FP51841 1108 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 PPATQ06203 517 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 ITGB3BPQ13352 177 aaPredicted RBP6.47□□□□□ -1.37
CASC3-202ENST00000394114 KCNB1Q14721 858 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 AFAP1L2Q8N4X5 818 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 DNAJC19Q96DA6 116 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 PDCD2LQ9BRP1 358 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 WRAP73Q9P2S5 460 aaPredicted RBP6.47□□□□□ -1.37
CASC3-202ENST00000394114 RWDD2AQ9UIY3 292 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 ADAMTS5Q9UNA0 930 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 DNM3Q9UQ16 869 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 RPTORQ8N122 1335 aa6.47□□□□□ -1.37
CASC3-202ENST00000394114 SOWAHBA6NEL2 793 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 PES1O00541 588 aaKnown RBP6.46□□□□□ -1.37
CASC3-202ENST00000394114 PSMA7O14818 248 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 TEX33O43247 280 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 CYP11B2P19099 503 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 CDC25BP30305 580 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 NEK2P51955 445 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 CNTN2Q02246 1040 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 STIM1Q13586 685 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 C10orf62Q5T681 223 aaPredicted RBP6.46□□□□□ -1.37
CASC3-202ENST00000394114 WDR78Q5VTH9 848 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 LHX8Q68G74 356 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 UNC13DQ70J99 1090 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 ARMC9Q7Z3E5 817 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 PNMA8AQ86V59 439 aaPredicted RBP6.46□□□□□ -1.37
CASC3-202ENST00000394114 NCAPG2Q86XI2 1143 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 ANKRD35Q8N283 1001 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 TEKT3Q9BXF9 490 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 LRRC3Q9BY71 257 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 ASCC2Q9H1I8 757 aaPredicted RBP6.46□□□□□ -1.37
CASC3-202ENST00000394114 VPS16Q9H269 839 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 CHRDQ9H2X0 955 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 ACAD9Q9H845 621 aa6.46□□□□□ -1.37
CASC3-202ENST00000394114 PANK4Q9NVE7 773 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms