RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 MAFO75444 373 aaPredicted RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 PRPF6O94906 941 aaKnown RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 RPLP2P05387 115 aaKnown RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 CTSHP09668 335 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 EEF1GP26641 437 aaKnown RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 NMT1P30419 496 aaKnown RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 RFC2P35250 354 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 COPB1P53618 953 aaKnown RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 TBC1D8BQ0IIM8 1120 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 MKRN4PQ13434 485 aaPredicted RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 BMT2Q1RMZ1 405 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 FILIP1LQ4L180 1135 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 ODR4Q5SWX8 454 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 EFCAB12Q6NXP0 572 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 STXBP4Q6ZWJ1 553 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 RSPH3Q86UC2 560 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 IRF2BP1Q8IU81 584 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 CREBRFQ8IUR6 639 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 NME8Q8N427 588 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 LRRC71Q8N4P6 559 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 CNOT6LQ96LI5 555 aaKnown RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 DRC1Q96MC2 740 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 OSBPL7Q9BZF2 842 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 UBE2OQ9C0C9 1292 aaKnown RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 KCTD10Q9H3F6 313 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 DHX33Q9H6R0 707 aaKnown RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 IL23AQ9NPF7 189 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 TAB2Q9NYJ8 693 aa14.9□□□□□ -0.02
PTN-202ENST00000393083 COLQQ9Y215 455 aaPredicted RBP14.9□□□□□ -0.02
PTN-202ENST00000393083 TANC1Q9C0D5 1861 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 K7ENM7 598 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 PARNO95453 639 aaKnown RBP14.89□□□□□ -0.03
PTN-202ENST00000393083 FGFR1OPO95684 399 aaKnown RBP14.89□□□□□ -0.03
PTN-202ENST00000393083 CXCL10P02778 98 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 ACRP10323 421 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 CLCN3P51790 818 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 MRPS6P82932 125 aaKnown RBP14.89□□□□□ -0.03
PTN-202ENST00000393083 DRP2Q13474 957 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 FAM102BQ5T8I3 360 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 CCDC186Q7Z3E2 898 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 VSTM4Q8IW00 320 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 METTL13Q8N6R0 699 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 FIZ1Q96SL8 496 aa14.89□□□□□ -0.03
PTN-202ENST00000393083 LARSQ9P2J5 1176 aaKnown RBP14.89□□□□□ -0.03
PTN-202ENST00000393083 DGAT1O75907 488 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 PLS3P13797 630 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 TMEM62Q0P6H9 643 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 KNOP1Q1ED39 458 aaKnown RBP14.88□□□□□ -0.03
PTN-202ENST00000393083 TMEM240Q5SV17 173 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 C9orf50Q5SZB4 431 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 LRRC55Q6ZSA7 311 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 FILIP1Q7Z7B0 1213 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 RPUSD2Q8IZ73 545 aaKnown RBP14.88□□□□□ -0.03
PTN-202ENST00000393083 ZNF507Q8TCN5 953 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 EEF2KMTQ96G04 330 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 SUGCTQ9HAC7 445 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 ATP6V0A4Q9HBG4 840 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 GPRC5CQ9NQ84 441 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 IMPACTQ9P2X3 320 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 CDY2AQ9Y6F7 541 aa14.88□□□□□ -0.03
PTN-202ENST00000393083 SCN5AQ14524 2016 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 PFKMP08237 780 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 MAPTP10636 758 aaKnown RBP14.87□□□□□ -0.03
PTN-202ENST00000393083 RFC5P40937 340 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 NR1I3Q14994 352 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 SHHQ15465 462 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 PTPN21Q16825 1174 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 IER5Q5VY09 327 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 ZNF365Q70YC5 407 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 ZNF720Q7Z2F6 126 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 DEFB128Q7Z7B8 93 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 MCPH1Q8NEM0 835 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.87□□□□□ -0.03
PTN-202ENST00000393083 VPS16Q9H269 839 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 RTN4Q9NQC3 1192 aaKnown RBP14.87□□□□□ -0.03
PTN-202ENST00000393083 TYW1Q9NV66 732 aaKnown RBP14.87□□□□□ -0.03
PTN-202ENST00000393083 ZMYM2Q9UBW7 1377 aa14.87□□□□□ -0.03
PTN-202ENST00000393083 N4BP3O15049 544 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 CALUO43852 315 aaPredicted RBP14.86□□□□□ -0.03
PTN-202ENST00000393083 GPR32O75388 356 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 VTNP04004 478 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 TPM2P07951 284 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 TMOD1P28289 359 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 HOXD13P35453 343 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 MTIF2P46199 727 aaKnown RBP14.86□□□□□ -0.03
PTN-202ENST00000393083 POLGP54098 1239 aaPredicted RBP14.86□□□□□ -0.03
PTN-202ENST00000393083 FKBP3Q00688 224 aaKnown RBP14.86□□□□□ -0.03
PTN-202ENST00000393083 ALCAMQ13740 583 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 EMC2Q15006 297 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 TCTN1Q2MV58 587 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 EDRF1Q3B7T1 1238 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 ZC2HC1CQ53FD0 456 aaPredicted RBP14.86□□□□□ -0.03
PTN-202ENST00000393083 EXOC8Q8IYI6 725 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 SLC7A3Q8WY07 619 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 EVPLQ92817 2033 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 KIFAP3Q92845 792 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 CEP63Q96MT8 703 aa14.86□□□□□ -0.03
PTN-202ENST00000393083 JPH2Q9BR39 696 aaPredicted RBP14.86□□□□□ -0.03
PTN-202ENST00000393083 CELF4Q9BZC1 486 aaKnown RBP14.86□□□□□ -0.03
PTN-202ENST00000393083 CDHR5Q9HBB8 845 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms