RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 HDAC6Q9UBN7 1215 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 NENFQ9UMX5 172 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 PPME1Q9Y570 386 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 DNAJC25-GNG10A0A024R161 153 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 ANKRD63C9JTQ0 380 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 POLGP54098 1239 aaPredicted RBP21.81■■□□□ 1.08
PTPN11-202ENST00000392597 BMS1Q14692 1282 aaKnown RBP21.81■■□□□ 1.08
PTPN11-202ENST00000392597 MTERF2Q49AM1 385 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 EPC2Q52LR7 807 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 C1orf220Q5T0J3 134 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 FAM160B1Q5W0V3 765 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 GJB7Q6PEY0 223 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 AFAP1L1Q8TED9 768 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 KIFC3Q9BVG8 833 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 ABT1Q9ULW3 272 aaKnown RBP21.81■■□□□ 1.08
PTPN11-202ENST00000392597 SNX12Q9UMY4 172 aa21.81■■□□□ 1.08
PTPN11-202ENST00000392597 GSTTP1A0A1W2PQM5 241 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 SORBS3O60504 671 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 GARTP22102 1010 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 RFC5P40937 340 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 SOX10P56693 466 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 DLG4P78352 724 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 KCTD2Q14681 263 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 DRAP1Q14919 205 aaPredicted RBP21.8■■□□□ 1.08
PTPN11-202ENST00000392597 SNRNP35Q16560 246 aaKnown RBP21.8■■□□□ 1.08
PTPN11-202ENST00000392597 KIAA0753Q2KHM9 967 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 SHCBP1Q8NEM2 672 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 SALL4Q9UJQ4 1053 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 TSKSQ9UJT2 592 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 NAGPAQ9UK23 515 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 ADGRA3Q8IWK6 1321 aa21.8■■□□□ 1.08
PTPN11-202ENST00000392597 CLCN6P51797 869 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 PPP3CAQ08209 521 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 ENOX2Q16206 610 aaKnown RBP21.79■■□□□ 1.08
PTPN11-202ENST00000392597 USP37Q86T82 979 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 TMC2Q8TDI7 906 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 MMP19Q99542 508 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 PORCNQ9H237 461 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 NRBP2Q9NSY0 501 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 INTUQ9ULD6 942 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 EVI5O60447 810 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 ADRB2P07550 413 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 ZBTB48P10074 688 aaPredicted RBP21.79■■□□□ 1.08
PTPN11-202ENST00000392597 ZSCAN20P17040 1043 aaPredicted RBP21.79■■□□□ 1.08
PTPN11-202ENST00000392597 RGMBQ6NW40 437 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 MSANTD4Q8NCY6 345 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 SEPT1Q8WYJ6 367 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 FGD4Q96M96 766 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 CEP89Q96ST8 783 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 GPR88Q9GZN0 384 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 PNMA3Q9UL41 463 aa21.79■■□□□ 1.08
PTPN11-202ENST00000392597 TUBBP07437 444 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 TCP1P17987 556 aaKnown RBP21.78■■□□□ 1.08
PTPN11-202ENST00000392597 GTF2H1P32780 548 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 MXI1P50539 228 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 SLC39A4Q6P5W5 647 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 ALKBH5Q6P6C2 394 aaKnown RBP21.78■■□□□ 1.08
PTPN11-202ENST00000392597 ANKRD13CQ8N6S4 541 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 PLEKHO2Q8TD55 490 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 MORC4Q8TE76 937 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 SLC7A3Q8WY07 619 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 FAM167AQ96KS9 214 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 MFSD14AQ96MC6 490 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 PCYT2Q99447 389 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 PCDHGC5Q9Y5F6 944 aa21.78■■□□□ 1.08
PTPN11-202ENST00000392597 HNRNPDLO14979 420 aaKnown RBP21.77■■□□□ 1.08
PTPN11-202ENST00000392597 GGPS1O95749 300 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 TFRCP02786 760 aaKnown RBP21.77■■□□□ 1.08
PTPN11-202ENST00000392597 GJA5P36382 358 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 ARL2P36404 184 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 NAMPTP43490 491 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 ZNF157P51786 506 aaPredicted RBP21.77■■□□□ 1.08
PTPN11-202ENST00000392597 TARBP2Q15633 366 aaKnown RBP21.77■■□□□ 1.08
PTPN11-202ENST00000392597 Q3C1V9 767 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 PHLDB3Q6NSJ2 640 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 CBWD2Q8IUF1 395 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 ZSWIM2Q8NEG5 633 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 PARD3BQ8TEW8 1205 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 PARD6BQ9BYG5 372 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 SIP14410 1827 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 KIAA0391O15091 583 aaKnown RBP21.77■■□□□ 1.08
PTPN11-202ENST00000392597 KLRC1P26715 233 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 GCLMP48507 274 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 STAT5BP51692 787 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 ERVK-9P63128 1117 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 TAS1R3Q7RTX0 852 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 POMGNT1Q8WZA1 660 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 TMEM117Q9H0C3 514 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 KIAA1586Q9HCI6 787 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 DDX41Q9UJV9 622 aaKnown RBP21.77■■□□□ 1.08
PTPN11-202ENST00000392597 HYOU1Q9Y4L1 999 aa21.77■■□□□ 1.08
PTPN11-202ENST00000392597 GOLGA8IPA6NC78 632 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 GOLGA8JA6NMD2 632 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 KIF22Q14807 665 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 IFI16Q16666 785 aaKnown RBP21.76■■□□□ 1.07
PTPN11-202ENST00000392597 SPRYD7Q5W111 196 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 TMCO3Q6UWJ1 677 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 ZNF572Q7Z3I7 529 aaPredicted RBP21.76■■□□□ 1.07
PTPN11-202ENST00000392597 RASAL3Q86YV0 1011 aa21.76■■□□□ 1.07
PTPN11-202ENST00000392597 GPD1LQ8N335 351 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms