RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 MGEA5O60502 916 aa27.93■■■□□ 2.06
HOMER3-202ENST00000392351 GCNT3O95395 438 aa27.93■■■□□ 2.06
HOMER3-202ENST00000392351 ZC2HC1CQ53FD0 456 aaPredicted RBP27.93■■■□□ 2.06
HOMER3-202ENST00000392351 FAM26FQ5R3K3 315 aa27.93■■■□□ 2.06
HOMER3-202ENST00000392351 FGFBP2Q9BYJ0 223 aa27.93■■■□□ 2.06
HOMER3-202ENST00000392351 ST6GALNAC4Q9H4F1 302 aa27.93■■■□□ 2.06
HOMER3-202ENST00000392351 ABHD14A-ACY1A0A1B0GW23 586 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 ACKR2O00590 384 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 BAIAP3O94812 1187 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 EDN1P05305 212 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 ZSCAN20P17040 1043 aaPredicted RBP27.92■■■□□ 2.06
HOMER3-202ENST00000392351 SCP2P22307 547 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 CASP5P51878 434 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 NCBP1Q09161 790 aaKnown RBP27.92■■■□□ 2.06
HOMER3-202ENST00000392351 STRN3Q13033 797 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 PRPF4BQ13523 1007 aaKnown RBP27.92■■■□□ 2.06
HOMER3-202ENST00000392351 CAMK4Q16566 473 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 C9orf50Q5SZB4 431 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 LINC01599Q8WXQ3 324 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 CPB2Q96IY4 423 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 USP20Q9Y2K6 914 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 CNTNAP2Q9UHC6 1331 aa27.92■■■□□ 2.06
HOMER3-202ENST00000392351 LAMA2P24043 3122 aaKnown RBP27.92■■■□□ 2.06
HOMER3-202ENST00000392351 TTLL13PA6NNM8 815 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 ZBBXA8MT70 800 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 MBD3O95983 291 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 ARF4P18085 180 aaPredicted RBP27.91■■■□□ 2.06
HOMER3-202ENST00000392351 HOXA11P31270 313 aaPredicted RBP27.91■■■□□ 2.06
HOMER3-202ENST00000392351 GTF2BQ00403 316 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 TMEM132AQ24JP5 1023 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 CHRDL2Q6WN34 429 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 KCNN1Q92952 543 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 CCDC47Q96A33 483 aaKnown RBP27.91■■■□□ 2.06
HOMER3-202ENST00000392351 ADAM2Q99965 735 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 CHST12Q9NRB3 414 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 TBX20Q9UMR3 447 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 PTPRSQ13332 1948 aa27.91■■■□□ 2.06
HOMER3-202ENST00000392351 EFCAB14O75071 495 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 SMC2O95347 1197 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 MYBP10242 640 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 AXLP30530 894 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 ABCD1P33897 745 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 DSC3Q14574 896 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 SHHQ15465 462 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 GLIS3Q8NEA6 775 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 HERVK_113Q902F9 699 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 TSPYL2Q9H2G4 693 aaPredicted RBP27.9■■■□□ 2.06
HOMER3-202ENST00000392351 PCDHA5Q9Y5H7 936 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 PPP1R37O75864 691 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 BMP8BP34820 402 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 TWF2Q6IBS0 349 aaKnown RBP27.9■■■□□ 2.06
HOMER3-202ENST00000392351 NOTUMQ6P988 496 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 FAM43BQ6ZT52 329 aaPredicted RBP27.9■■■□□ 2.06
HOMER3-202ENST00000392351 RTN4RL1Q86UN2 441 aaPredicted RBP27.9■■■□□ 2.06
HOMER3-202ENST00000392351 SMARCE1Q969G3 411 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 MRPL4Q9BYD3 311 aaKnown RBP27.9■■■□□ 2.06
HOMER3-202ENST00000392351 MTIF3Q9H2K0 278 aaKnown RBP27.9■■■□□ 2.06
HOMER3-202ENST00000392351 CLSTN2Q9H4D0 955 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 SLC39A2Q9NP94 309 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 CXXC1Q9P0U4 656 aaPredicted RBP27.9■■■□□ 2.06
HOMER3-202ENST00000392351 PCDHB13Q9Y5F0 798 aa27.9■■■□□ 2.06
HOMER3-202ENST00000392351 TTC3P53804 2025 aa27.89■■■□□ 2.06
HOMER3-202ENST00000392351 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.89■■■□□ 2.05
HOMER3-202ENST00000392351 RHOBTB3O94955 611 aa27.89■■■□□ 2.05
HOMER3-202ENST00000392351 WDR5P61964 334 aaKnown RBP27.89■■■□□ 2.05
HOMER3-202ENST00000392351 KCNB1Q14721 858 aa27.89■■■□□ 2.05
HOMER3-202ENST00000392351 NT5DC1Q5TFE4 455 aa27.89■■■□□ 2.05
HOMER3-202ENST00000392351 GSDMAQ96QA5 445 aa27.89■■■□□ 2.05
HOMER3-202ENST00000392351 STRA6Q9BX79 667 aa27.89■■■□□ 2.05
HOMER3-202ENST00000392351 ENPP3O14638 875 aa27.88■■■□□ 2.05
HOMER3-202ENST00000392351 KCNJ6P48051 423 aa27.88■■■□□ 2.05
HOMER3-202ENST00000392351 PSMD2Q13200 908 aa27.88■■■□□ 2.05
HOMER3-202ENST00000392351 ALCAMQ13740 583 aa27.88■■■□□ 2.05
HOMER3-202ENST00000392351 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.88■■■□□ 2.05
HOMER3-202ENST00000392351 STXBP4Q6ZWJ1 553 aa27.88■■■□□ 2.05
HOMER3-202ENST00000392351 CDR2LQ86X02 465 aaPredicted RBP27.88■■■□□ 2.05
HOMER3-202ENST00000392351 SPATA20Q8TB22 786 aa27.88■■■□□ 2.05
HOMER3-202ENST00000392351 HVCN1Q96D96 273 aa27.88■■■□□ 2.05
HOMER3-202ENST00000392351 BICD1Q96G01 975 aa27.88■■■□□ 2.05
HOMER3-202ENST00000392351 RNPC3Q96LT9 517 aaKnown RBP27.88■■■□□ 2.05
HOMER3-202ENST00000392351 TARS2Q9BW92 718 aaKnown RBP27.88■■■□□ 2.05
HOMER3-202ENST00000392351 NUP62CLQ9H1M0 184 aa27.88■■■□□ 2.05
HOMER3-202ENST00000392351 RGS18Q9NS28 235 aa27.88■■■□□ 2.05
HOMER3-202ENST00000392351 STK4Q13043 487 aa27.87■■■□□ 2.05
HOMER3-202ENST00000392351 ATF7IP2Q5U623 682 aa27.87■■■□□ 2.05
HOMER3-202ENST00000392351 MAP4K3Q8IVH8 894 aa27.87■■■□□ 2.05
HOMER3-202ENST00000392351 RMND1Q9NWS8 449 aa27.87■■■□□ 2.05
HOMER3-202ENST00000392351 A0A1B0GUA9 196 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 PRPF6O94906 941 aaKnown RBP27.86■■■□□ 2.05
HOMER3-202ENST00000392351 IBSPP21815 317 aaPredicted RBP27.86■■■□□ 2.05
HOMER3-202ENST00000392351 KCNA1Q09470 495 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 L1TD1Q5T7N2 865 aaKnown RBP27.86■■■□□ 2.05
HOMER3-202ENST00000392351 SLC24A5Q71RS6 500 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 KIAA0895Q8NCT3 520 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 CCDC51Q96ER9 411 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 ACO2Q99798 780 aaKnown RBP27.86■■■□□ 2.05
HOMER3-202ENST00000392351 PDZD7Q9H5P4 517 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 C1orf112Q9NSG2 853 aa27.86■■■□□ 2.05
HOMER3-202ENST00000392351 HNRNPDLO14979 420 aaKnown RBP27.86■■■□□ 2.05
HOMER3-202ENST00000392351 EIF3DO15371 548 aaKnown RBP eCLIP27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms